Oligella urethralis: CEQ07_09340
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Entry
CEQ07_09340 CDS
T05343
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
our
Oligella urethralis
Pathway
our03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
our00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CEQ07_09340 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
our03019
]
CEQ07_09340 (pnp)
03016 Transfer RNA biogenesis [BR:
our03016
]
CEQ07_09340 (pnp)
Enzymes [BR:
our01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CEQ07_09340 (pnp)
Messenger RNA biogenesis [BR:
our03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CEQ07_09340 (pnp)
Transfer RNA biogenesis [BR:
our03016
]
Prokaryotic type
tRNA degradation factors
CEQ07_09340 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH_2
KH-I_KHDC4-BBP
S1_RRP5
KH_KhpA-B
DUF5813
Bac_luciferase
Motif
Other DBs
NCBI-ProteinID:
AVL71601
LinkDB
All DBs
Position
complement(1957007..1959154)
Genome browser
AA seq
715 aa
AA seq
DB search
MFNKFTQSFQYGEHTVTLETGEIARQATGAVLASMGDTVVLATVVAAKDAKPGQDFFPLT
VDYIEKAYAAGMIPGGFFKREAKPSEKETLTSRLIDRPLRPLFPEGFYNEVQVIVHVLSV
DPEIDPDIIAMIASSAAVTIAGIPFDGPIGAARVGYIDGNYVLNPSPSQLEKSQMDLVVA
GTEAAVLMVESEAKQLSEEVMLGGVVFGHEQMQAAINAINELIEKAGKPAWDWQPAPKNE
ALVAQIKAAAQEGLQAAYKVREKQARSTQIKQIHAAVQEQLAAAAADKGEELDAVEVENI
LFSLESEIVRSQILNGEPRIDGRDTRTVRPISIRLGVLPRTHGSVLFTRGETQAIVVATL
GTKQDEQIIDSVMGEGRERFMLHYNFPPFSTGETGRVGSPKRREIGHGRLAKRALVATLP
KHDDFQYTIRLVSEITESNGSSSMASVCGGSLALMDAGVPVQDHVAGVAMGLIKEDNKFA
VLTDILGDEDHLGDMDFKVAGTKAGITALQMDIKIQGITKEIMQAALAQAKEGRMHILGK
MEEAISGSRSELSSFAPRMLTVKINPEKIRDVIGKGGATIRALTEETGSQIDISDDGLVT
ISSADLDKAKEAERRILEITAEVEVNQVYEGTVQRMLDFGAIVQILPGRDGLLHISEIAN
YRINDINEVLKVGQKLRVKVIEADDRGRIRLSVKALGGIENEENLLGEVDTPAAE
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgtttaataaatttactcagtcttttcagtatggtgagcatactgttaccctagaaacc
ggcgagattgcgcgtcaggcgacgggtgctgtgttagcttcgatgggcgatacggttgtg
ttagcgaccgtggttgccgctaaggatgctaagccaggccaggattttttcccactgacc
gtggactatattgaaaaggcctacgccgctggtatgattcccggcggtttctttaagcgt
gaagctaagccttccgaaaaggaaacccttacctctcgtttaattgaccgtcctttgcgt
cccttattccctgagggtttttataatgaagtgcaagtgattgtgcatgtgttatcggtg
gatccagagattgatcccgatattattgccatgattgcaagttcagcggcggtaacgatt
gctggtattccatttgatggtcctatcggcgcggcacgtgtgggttatattgatggcaat
tacgtgctgaatccgagccctagccaattagaaaaatcgcagatggatttagtggtagcg
ggtacagaagctgcggtgttgatggttgagtccgaggccaagcaactatccgaagaggtg
atgctaggcggtgtggtgtttggtcatgagcaaatgcaagccgcgattaatgcgattaat
gagctgatagaaaaagcaggtaagcctgcttgggattggcagccagcccctaaaaatgaa
gccctagtagctcaaattaaagcggcagcacaagagggtcttcaagccgcatataaagtg
cgtgaaaagcaagcgcgtagtacgcaaatcaagcaaatccatgcagcggtgcaggagcag
ttagccgctgctgccgctgacaaaggcgaagagcttgacgcggttgaggttgaaaatatt
cttttctcgctagagtctgagattgtgcgtagtcaaatccttaacggtgagccgcgtatt
gacggccgtgatacccgcaccgtccgtcctatttcgattcgtttaggtgtgttgccacgg
acccatggtagcgttttatttacgcgcggtgaaacacaggctatcgtggtggcgaccctt
gggaccaagcaggatgagcaaatcattgattcggtgatgggtgagggacgtgaacgcttt
atgttgcattacaacttcccaccgttttctaccggtgaaaccggtcgcgtaggttcgcct
aagcgtcgcgaaatcggtcatggtcgtttggcaaagcgtgccttagttgccaccttgccc
aagcacgatgatttccagtacaccattcgtttggtgtctgagattacggagtctaacggt
tcttcctcaatggcttcggtgtgtggcggtagcttggccttgatggatgcgggtgtaccg
gtgcaggatcacgtggctggcgtggcgatgggtcttatcaaagaggataataaattcgcc
gtgctgactgatattctgggtgatgaggatcacttaggcgatatggactttaaagtcgct
ggtaccaaagcgggtattactgccttacagatggatattaagatccaaggcattaccaaa
gaaattatgcaggctgcgttggctcaggccaaagagggtcgtatgcatatcttgggtaag
atggaagaagcgatttctggttcgcgtagcgagctttccagctttgcgccacgtatgttg
acggttaaaatcaaccctgaaaaaatccgtgatgtgattggtaagggtggtgcgacgatt
cgcgcgctaaccgaggaaacaggtagccaaatcgatatcagtgatgacggtctagtgaca
atttctagtgccgatttagataaggcaaaagaggcagagcgtcgtattcttgagattacc
gctgaggttgaggtaaatcaggtgtatgagggtacggtgcagcgcatgctagattttggt
gcgattgtacaaatcctaccgggtcgcgatggtttactgcatatttctgaaatcgctaat
taccgcattaatgatattaatgaggtacttaaagtgggtcagaagctacgcgttaaggtg
atcgaagcggatgatcgcggtcgtatccgtttatcggtgaaggccttaggcgggattgaa
aacgaagaaaacctactgggtgaggttgatacgcctgcagcagagtaa
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