Oligella urethralis: CEQ07_09695
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Entry
CEQ07_09695 CDS
T05343
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
our
Oligella urethralis
Pathway
our03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
our00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CEQ07_09695
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
our03400
]
CEQ07_09695
Enzymes [BR:
our01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
CEQ07_09695
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CEQ07_09695
DNA repair and recombination proteins [BR:
our03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CEQ07_09695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
C1_2
NFACT_N
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
AVL71661
LinkDB
All DBs
Position
2027942..2028769
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AA seq
275 aa
AA seq
DB search
MPELPEVETTRRGLAPAIEGQRLQKLSIYQTQLRWPILPELAEILSGQLLIKCERRGKYL
LLHFESGVLLVHLGMSGSMRLCHAEELLRKHDHVIWDFGHITVRLNDPRRFGAVVWHPHG
DGPVLAHPLLKQLGVEPLSDDFTIAHLYQGLKRKKKAIKTALLDGDIVVGVGNIYASESL
FLAKINPKVSAQSLSKARVERLHAAILSTLNAALASGGSTLRDFLNANGEPGSYFEIHAN
VYDRENQPCHVCGTPIRKIVQGQRATYYCVKCQRY
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgccagaattacctgaagtcgaaaccacgcgtcgcggacttgcaccggccattgagggt
caacgcctacagaagctcagcatttatcaaacacagctccgttggcccattttacctgag
ttggcagagattttgagtggtcaattattaataaaatgtgaacgtcgtggcaagtacctg
ctcttacactttgaaagcggtgtgttattagtgcatttgggcatgtccggctccatgcgt
ctatgccacgccgaggagttactgcgaaagcatgatcatgtgatttgggatttcggtcat
attaccgtacgactcaatgatccacgccgtttcggggcagtggtctggcatcctcatggc
gatggacccgtgttagcgcaccccttattaaagcagctaggggtggagcctttgagtgat
gattttacgatcgcgcatttataccaaggcttaaagcgcaagaaaaaagccattaaaacg
gcgctgttagacggcgatatcgtagtaggcgtaggcaatatttacgcctccgaaagtctt
tttttagccaagatcaacccaaaggtgagtgcccaatcgctctccaaagctcgggttgag
cgcttgcacgctgccattttaagcactttgaatgcagcgctagccagtggtggcagcacc
ctcagggactttttaaacgccaacggtgagcccggcagctactttgaaattcatgccaat
gtctatgatcgggaaaatcagccctgccatgtctgtggcacgccaattagaaaaatcgtc
cagggtcaacgcgccacctactattgcgtgaaatgtcaacgctactaa
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