Oscillibacter valericigenes: OBV_00410
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Entry
OBV_00410 CDS
T01636
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
ova
Oscillibacter valericigenes
Brite
KEGG Orthology (KO) [BR:
ova00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ova03032
]
OBV_00410 (gyrB)
03400 DNA repair and recombination proteins [BR:
ova03400
]
OBV_00410 (gyrB)
Enzymes [BR:
ova01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
OBV_00410 (gyrB)
DNA replication proteins [BR:
ova03032
]
Prokaryotic type
DNA Topoisomerases
OBV_00410 (gyrB)
DNA repair and recombination proteins [BR:
ova03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
OBV_00410 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
Toprim_4
VasX_N
Motif
Other DBs
NCBI-ProteinID:
BAK97239
LinkDB
All DBs
Position
complement(38911..40896)
Genome browser
AA seq
661 aa
AA seq
DB search
MASKKDYGNESISSLKGADRVRKRPGVIFGSDGLEGCEHAVFEILSNAIDEAREGHGALI
TVTRYLDRSIEVEDLGRGCPLDWNEKEGRWNWELVFCELYAGGKYDNNSGDNYEYSLGLN
GLGSCATQYASQYMDVTVRRDGKKYTLHFEKGENIGGLHNEPTDRGKKTGTIIRWLPDLD
VFTDTAIPAEYFTDVMKRQAVVNAGVTFRFRNEAVPGHFETEDFFYKDGIVDYVTELAGE
GSLTAPIFWETERRGRDRADKPEYKVKLSAACCFSNRVNIIEHYHNSSWLEHGGSPEKAA
KSAFVSAIDQYLKQNGKYQKTESKITWNDVEDCLVLVSNNFSTATSYENQTKKAITNKFV
QEAMTDFLRSNLEVYFIENPFDAEKIAEQVLINKRSRESAEKARLNIKKKLSGNIDIANR
VEKFVDCRSKDVTRREIYIVEGDSALGSVKMGRDAEYQGIMPVRGKILNCLKADYARIFK
SEIITDLMKVLGCGVEVKDRHVKDLAEFDVGNLRWNKVVICTDGDVDGFQIRTLILTMLY
RLTPTLIREGYVYIAETPLFEINCGEKTWFAYSDKEKNDIIRDLSGKKMKVDRSKGLGEN
EPEMMWLTTMNPETRRLIRVQPSDVAETARVFDLLLGDNLQGRKDHIAENGFKYLEMADI
S
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaaaaaaggactatggcaacgagagcatctcctctttgaaaggcgcggatcgg
gtacgaaaacgtcccggcgtcattttcggttccgatgggctggagggctgcgagcacgcg
gtgtttgagattctctccaacgccatcgacgaggcccgtgagggccacggcgcccttatc
accgttacccggtatctggaccgctccattgaggtggaggacctgggccggggctgcccg
ctggactggaacgaaaaggaggggcgatggaactgggagctggtattctgcgagctgtat
gccggcggaaaatacgacaacaacagcggcgataactacgaatactctctgggcctgaac
gggctgggttcctgcgcgacccaatatgcctcccaatacatggacgtgacggtccgccgg
gacggaaagaagtacacgcttcactttgaaaagggcgaaaatatcggcggactccataat
gagcctaccgaccggggcaaaaagaccggaaccatcatccggtggctgccggatctggac
gtattcacggacaccgccatcccggcggagtatttcaccgacgtgatgaagcggcaggcg
gtggtgaacgcgggcgtcaccttccgtttccgaaacgaggccgtccccggccactttgag
acggaggacttcttctacaaagacggcatcgtggactacgtgacggagctggcgggggag
gggagccttacggcccccatcttctgggagacggagcgcaggggccgggaccgggcggac
aagccggagtataaggtgaagctcagcgcggcctgctgcttttcaaaccgggtgaacatc
atcgaacactaccacaactccagctggctggaacacggcggcagcccggaaaaggccgcc
aagtctgctttcgtctccgcaatcgaccagtatctcaagcagaacgggaagtatcagaaa
actgaaagcaagatcacctggaacgacgtggaggactgcctggtgctggtctccaacaat
ttttccaccgccaccagctatgaaaaccagacgaaaaaggccatcaccaacaagttcgtg
caggaggccatgacagacttcctgcggagtaatctggaggtttatttcatcgagaacccc
tttgatgcggagaaaatcgcggaacaggttctcattaacaagcgcagccgggagagcgcg
gaaaaggcacggctgaacatcaagaaaaagctctccggcaacatcgacatcgccaatcgg
gtggaaaagttcgtggactgccggtcaaaggacgtgacccgccgagagatctacattgtg
gagggcgactccgctctcggaagcgtaaaaatgggccgggacgcggagtatcagggcatc
atgcctgtccggggcaagattttgaactgcctgaaggcggactacgcccgcattttcaaa
agcgaaattatcacggacctgatgaaggtgctgggctgcggcgtggaagtaaaggacagg
cacgtgaaggacctggcggagttcgacgtagggaacctccgatggaacaaggtcgtgatc
tgcaccgatggcgacgtggacggtttccagattcgaacgctgatcctgaccatgctgtac
cgcctcacccccaccctgatccgggagggctacgtctatatcgcggaaaccccgctcttc
gagatcaactgcggggagaagacgtggttcgcctactcggacaaggaaaaaaacgacatt
atccgggacctttccgggaagaagatgaaagtggaccggtccaagggtctgggcgaaaac
gaacccgagatgatgtggctcaccaccatgaatccggagacccggcgcctgatccgggtg
cagccctctgacgttgcggagacggcccgggtctttgacctgctgctgggggataatctt
cagggccggaaggaccacattgcggaaaacgggtttaaatacctggaaatggcggacatt
tcctga
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