Oscillibacter valericigenes: OBV_09200
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Entry
OBV_09200 CDS
T01636
Name
(GenBank) putative 3'-5' exonuclease
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
ova
Oscillibacter valericigenes
Brite
KEGG Orthology (KO) [BR:
ova00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ova03019
]
OBV_09200
Messenger RNA biogenesis [BR:
ova03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
OBV_09200
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
UPF0323
Motif
Other DBs
NCBI-ProteinID:
BAK98118
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All DBs
Position
complement(867186..868121)
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AA seq
311 aa
AA seq
DB search
MYIKDMSIGEQIEGFFLLQDAFAKTTMSGKPFLSMVLSDCTGTIDAQIWDYTGPVTPKDT
GAVVKIRGTGSEFKGTLQITAERLRLAESNDQYNISDLVPTAPIDAEAVWQKLLETVDTI
EDRDYRSICKEMLDKYGERVKSIPAAKSVHHSFLNGLLMHTTYMLKTADFLTGLYESVID
RSLLLAGTLLHDFAKCEEFTTSQLGLVTDYSMKGQLLGHLVMGAHEVANVAAELHVPEEK
SVLLQHLILSHHGEPEFGAAVRPMCAEGELLSYIDMIDSRMEIYRETLEEVPAGEFSRRI
FALDRRIYHHN
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgtacatcaaagatatgagcatcggcgagcagatcgaaggattttttctgctgcaggat
gcgtttgcaaaaacaacaatgagcgggaaaccgttcctgagtatggtcttatccgactgc
actgggacgatcgacgcgcagatttgggattataccggtccagtgacgccgaaagataca
ggggctgtggtgaaaattcgaggaaccggctccgagtttaagggcacattgcagattacg
gcggagcgcctgcgccttgccgagtcgaacgaccaatacaacatcagcgatttagttccc
accgcgccgattgatgctgaggcagtctggcagaagctgctggaaaccgtcgatacaatc
gaggatcgagattacagatcaatctgtaaggagatgcttgacaaatacggtgagagagtc
aaaagcatccccgcggccaaaagcgttcaccacagttttttaaatgggcttttgatgcac
acgacgtatatgcttaagaccgccgattttttgaccggactatacgaatcggtaatcgac
cgcagtctgctgctcgccggaactctgctccacgatttcgcgaaatgcgaggagttcaca
acgtcgcagcttgggcttgtcacggattattccatgaaagggcaactgctcggccatctc
gtaatgggtgctcacgaagtagccaatgtcgctgctgagctacatgtgccggaggaaaaa
tcggtactgctccagcaccttattctgtcccaccacggagagccggagtttggtgccgct
gtccggccgatgtgtgctgagggagagttgctgtcgtatattgatatgattgacagccgc
atggagatctaccgcgaaacgctggaggaagttcctgccggagaattcagcaggagaatc
tttgcgttggatcgtaggatctaccaccataattag
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