Oscillibacter valericigenes: OBV_10010
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Entry
OBV_10010 CDS
T01636
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ova
Oscillibacter valericigenes
Pathway
ova03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ova00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
OBV_10010 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ova03021
]
OBV_10010 (rpoA)
03400 DNA repair and recombination proteins [BR:
ova03400
]
OBV_10010 (rpoA)
Enzymes [BR:
ova01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
OBV_10010 (rpoA)
Transcription machinery [BR:
ova03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
OBV_10010 (rpoA)
DNA repair and recombination proteins [BR:
ova03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
OBV_10010 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
RAD51D_N
DUF2325
Motif
Other DBs
NCBI-ProteinID:
BAK98199
LinkDB
All DBs
Position
932735..933691
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AA seq
318 aa
AA seq
DB search
MIEIEKPQIECIEAPGDITYGKYVVEPLERGYGTTLGNALRRIMLSSLPGTAATSIKITG
VQHEFSTIPGVKEDVTEIVLNIKGLLTKLHGESGKTVYIEAVGPCEVTAGDIKADGEVEI
LNPELHIATLDSGSTLNMEITLSHGRGYVSADKNKQAMSQQVIGVIPIDSIYTPVYKVNY
SVEPTRVGTSSDFDKLTLEVWTDGTISARDAVSLGAKILCDHFTLFTDLSENVGSKPTVV
EKGETQRDKVLEMTIEELDLSVRSFNCLKRANINTVEDLISKTEDEMMKVRNLGRKSLEE
VVNKLSMMGLSLADEENN
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaaatcgagaagcctcagatcgaatgtatcgaggctcccggtgatatcacctac
ggcaagtacgtggtggagccgctggagaggggctatggtaccacgctgggcaatgcgctt
cgtcgcattatgctttcctctttgcccggcaccgctgcgacctccatcaagattaccgga
gtccagcacgagttttccacgattcccggtgtcaaggaggatgtgacggagattgtcctg
aatatcaagggcctcctgaccaagctccacggcgagagcgggaagacggtctatattgaa
gcagttggcccctgtgaggtcactgccggcgatattaaggccgacggcgaggtggagatt
ctcaatcctgagctccacattgccacgctggacagcggctccacgctgaatatggaaatc
actttgtcccacggccggggctatgtgtctgccgacaagaacaagcaggccatgagccag
caggtgatcggtgtgattcccattgattcgatttacaccccggtgtataaagtcaactac
tctgtggagcccacacgtgtgggtacgtccagtgattttgacaagcttacgctggaagtc
tggaccgatggtaccatttccgcccgggatgccgtgtccctaggggccaagattctttgc
gaccacttcacgttgttcaccgatctttctgagaatgtgggcagcaagcccacggtggtg
gaaaagggggaaacgcagcgggacaaggtcctagagatgaccattgaagagctggatctc
agtgtacgaagcttcaactgcctcaagcgcgctaacatcaacaccgtcgaagatttgatc
tccaagaccgaggatgagatgatgaaggttcgcaatctgggccgtaagtctctggaggaa
gttgtcaataagttgtccatgatgggcctttctctggccgacgaagagaataactga
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integrated database retrieval system
