Oscillibacter valericigenes: OBV_10050
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Entry
OBV_10050 CDS
T01636
Symbol
nfo
Name
(GenBank) endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
ova
Oscillibacter valericigenes
Pathway
ova03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ova00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
OBV_10050 (nfo)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ova03400
]
OBV_10050 (nfo)
Enzymes [BR:
ova01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
OBV_10050 (nfo)
DNA repair and recombination proteins [BR:
ova03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
OBV_10050 (nfo)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
MspA
DUF2124
Motif
Other DBs
NCBI-ProteinID:
BAK98203
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All DBs
Position
complement(936603..937448)
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AA seq
281 aa
AA seq
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MLKIGCHLSSSKGFLSMGKTAVEIGANTFQFFTRNPRGGAAKPLDEADIAAYRAFAAEHN
LFPVLAHAPYTLNCCAADPGLREFAKNTMADDLARLEHLPGSLYNFHPGSHVKQGVDIGV
AWIAEALNTVLKPGQSTTVLLETMAGKGSEVGRTFEELRAVIDRVEHSELLGVCLDTCHV
YDGGYDLVNDLDGVLDAFDRTVGLDCLRAVHLNDSKNPFSSHKDRHEKIGEGSIGLPAFT
AIINHPRLRNLPFYLETPQEDVSGYGREIALLKSRFSERYD
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaaattggctgtcatctctcctcttccaagggctttttgtccatggggaaaaca
gcggtggaaattggtgcgaataccttccagttttttacccgcaatccccggggcggtgcg
gcaaagcctctggatgaggcggacattgccgcctatcgcgcttttgccgcggaacacaat
ctctttcctgttctggcccacgcaccctataccctgaactgctgcgccgccgatcctggc
cttcgggaatttgccaaaaacacgatggcggacgatcttgcccgtctggagcacctcccc
ggcagtctttataattttcaccccggcagccacgtgaagcagggcgtggacattggcgtt
gcctggatcgcagaggcgctgaacaccgttctaaagcccggccaatccaccactgtgctc
ctcgagaccatggcaggcaagggcagcgaagtgggccgcactttcgaagagttgagggcc
gtgatcgaccgggtggagcattctgagttgctgggcgtgtgtctggacacctgccacgtg
tacgacggcgggtacgatctggtgaacgatctggacggtgtactggacgcttttgaccgg
acggtgggcttggattgtctgagggccgtccacctgaacgacagcaagaatcccttttcc
agccataaggaccgccacgagaaaattggcgagggcagcattgggctccccgctttcacc
gccattatcaaccacccgcggctgcggaacctgcccttttatctggagacgccccaggag
gacgtgagcggctacgggcgggaaattgccctgctgaaaagccggttttcagagaggtac
gattaa
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