Oscillibacter valericigenes: OBV_10220
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Entry
OBV_10220 CDS
T01636
Symbol
birA
Name
(GenBank) transcriptional regulator/biotin--[acetyl-CoA-carboxylase] ligase
KO
K03524
BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:
6.3.4.15
]
Organism
ova
Oscillibacter valericigenes
Pathway
ova00780
Biotin metabolism
ova01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ova00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
OBV_10220 (birA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ova03000
]
OBV_10220 (birA)
Enzymes [BR:
ova01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.15 biotin---[biotin carboxyl-carrier protein] ligase
OBV_10220 (birA)
Transcription factors [BR:
ova03000
]
Prokaryotic type
Helix-turn-helix
Other families
OBV_10220 (birA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BPL_LplA_LipB
HTH_11
HTH_24
BPL_C
MarR_2
Rrf2
HTH_23
HTH_IclR
BPL_LplA_LipB_2
HVO_A0261_N
MarR
HTH_AsnC-type
HTH_46
PF0610-like_N
HTH_Crp_2
Fe_dep_repress
Sigma70_r4_2
RPA_C
HTH_54
GntR
NirdL-like_HTH
HTH_1
HTH_50
TrmB
Motif
Other DBs
NCBI-ProteinID:
BAK98220
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All DBs
Position
952249..953289
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AA seq
346 aa
AA seq
DB search
MLTGNLRKEADCMSRQKVLELLKSRPTDYLSGEEIAKRLGLSRAAVWKAVDALRKEGYSI
EARTGLGYRLTASPDALTEKEIRGFLGETALVGRRLICLESVDSTNTYLKKQALSGIPDG
TVVTADCQIGGRGRMDRAFRNPKGKLVALSVLLRPEVPLDRLTCVTAQTAVALCGAVEEV
CGVRPQIKWTNDLVIGRKKLCGILTEMALEGESGRLQYLVIGIGVNVHQTPEDFGPELGE
IAVSLDMVLDRPVSRPALAAAEIRALDRLYADICRGDTRRYLDDYRRDCVTLGKTVQLIS
ADGRRETARALDIDDEFGLVVRLEDGSERTIRTGEVSVRGMYGYVD
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgctgacagggaatttgcggaaggaggcggactgcatgagccgtcaaaaggtattggaa
ttgctgaagagccgcccgacggactacctctccggagaggagatcgccaagcggctgggg
ctgagtcgggcggctgtgtggaaggcggtggacgccctgcggaaagagggctattccatc
gaggcccggacaggtcttggataccggctcaccgcctcaccggacgctctgacggaaaag
gaaatacggggttttctgggagagaccgctctggtggggagaaggcttatatgtcttgag
agcgtcgattccaccaatacctatttgaagaagcaggccctgtccggaataccggatggc
acagtggtcacggcggactgccagatcggcggccggggccgcatggatcgggcgttccgg
aacccaaaaggaaagctggtggcgctgtccgtactcctgcggcccgaggttccgctggac
cgtttgacctgcgtcacagcccagaccgccgtggccctgtgcggcgcggtggaggaggtc
tgcggtgttcgtccgcagatcaagtggaccaacgacttggtgattggtcgaaaaaagctc
tgcggcattttgacggaaatggcgctggagggggagagtggccgacttcagtatctggtg
atcggaataggcgtcaatgtccaccagacgccggaggatttcgggccggagcttggggag
attgctgtgtcgctggacatggtcctggacagacctgtttcccgtccggcgctggctgcg
gcggagatccgggcgctggaccggctgtacgcggatatctgccggggggatacccggcgg
tatctggatgactatcggcgggactgcgtgacgctcggcaagaccgtgcagctgatctcc
gccgatgggagacgcgagactgcgcgggcgctggatatcgatgacgagttcgggttggtt
gtgcggctggaggacggatcggagcggaccatccgcaccggtgaggtttctgtcagaggt
atgtacggatacgtagactga
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integrated database retrieval system
