Oscillibacter valericigenes: OBV_15680
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Entry
OBV_15680 CDS
T01636
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
ova
Oscillibacter valericigenes
Pathway
ova00260
Glycine, serine and threonine metabolism
ova00460
Cyanoamino acid metabolism
ova00630
Glyoxylate and dicarboxylate metabolism
ova00670
One carbon pool by folate
ova00680
Methane metabolism
ova01100
Metabolic pathways
ova01110
Biosynthesis of secondary metabolites
ova01120
Microbial metabolism in diverse environments
ova01200
Carbon metabolism
ova01230
Biosynthesis of amino acids
ova01240
Biosynthesis of cofactors
ova04981
Folate transport and metabolism
Module
ova_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
ova00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
OBV_15680 (glyA)
09102 Energy metabolism
00680 Methane metabolism
OBV_15680 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
OBV_15680 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
OBV_15680 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
OBV_15680 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
OBV_15680 (glyA)
Enzymes [BR:
ova01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
OBV_15680 (glyA)
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
BAK98766
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Position
1513374..1514621
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AA seq
415 aa
AA seq
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MMHETMDFISKFDPEVGASIKEEFARERRNIELIASENIVSEAVMLTMGTCLTNKYAEGY
PGHRYYGGCYAVDVLEEIARKRACELFGCNHANVQPHSGANANLAAFFALVKPGDTVMGM
NLAHGGHLSHGSPVNISGKYFNIVPYGLDEETEQIDYDALMKTAQACKPKLIIAGASAYS
RIIDFKKFREVADAVGAYLMVDMAHIAGLVAAGVHPSPIPYADVVTTTTHKTLRGPRGGM
ILCNDDEVYKKINSAVFPGTQGGPLEHIIAAKAVCFGEALKPEFKEYQRQVVKNAAALAE
GLTKEGFRLVSGGTDNHLMLVDVRNFHITGKEFERRLDEVQITVNKNAIPNDPEKPFVTS
GIRVGTPAATSRGFREPEMARIARWMGETARDFDASAAQVKAEVNALCEAFPIYR
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgatgcacgagaccatggactttatttccaagtttgatcccgaggtgggagcgtccatc
aaagaggaattcgcacgggagcgccggaatatcgaattgattgccagcgaaaatatcgtc
agcgaggcggttatgctgaccatgggaacctgcctgaccaacaagtacgccgagggctat
cccggacaccggtattatggcggatgctacgctgtggacgtactggaggagattgcccgc
aagcgggcctgcgagctatttggctgcaatcatgccaacgtccagccgcactccggagcc
aacgcaaatctggcggcgttcttcgccctggtaaagcccggtgataccgtgatgggcatg
aacctggcccacggcggacatctgagccacggcagccccgtgaacatctcgggcaaatat
tttaatattgtcccctacggcttggatgaggagacagagcaaatcgattacgatgcgctg
atgaaaactgcgcaggcatgcaagcccaaactgattatcgcgggcgcctccgcctattca
cggatcatcgacttcaagaagttccgggaggttgcagatgcggtgggcgcctacctgatg
gtggacatggcccacatcgcgggccttgttgccgcgggtgtccatccttcccccatcccc
tatgccgacgttgtgaccaccaccacacacaagaccctgcggggtccccggggcggcatg
attctgtgcaacgatgacgaagtctataagaaaatcaactccgccgtattccccggtacc
cagggtggcccgctggagcacatcatcgcggccaaggctgtgtgcttcggcgaggcgctg
aagccggagttcaaggagtatcagcggcaggtggtgaaaaacgccgcagctctcgcggag
ggtctcaccaaagagggcttccgtctggtctccggcggaacggacaaccatctgatgctg
gtggacgtgcggaacttccatatcaccggcaaggaatttgagcggcggctggacgaggtt
cagatcaccgtcaacaagaatgccatccccaacgacccggagaagcccttcgtcacctcc
ggtattcgggtggggactcccgccgctacctcccggggattcagggagccggagatggcg
aggattgcccgctggatgggcgagaccgcccgggactttgacgccagcgccgcgcaggtc
aaggcggaggtcaacgccctgtgcgaggcgttccctatctatcgctaa
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