Oscillibacter valericigenes: OBV_21190
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Entry
OBV_21190 CDS
T01636
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ova
Oscillibacter valericigenes
Pathway
ova03420
Nucleotide excision repair
ova03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ova00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
OBV_21190 (pcrA)
03430 Mismatch repair
OBV_21190 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ova03400
]
OBV_21190 (pcrA)
Enzymes [BR:
ova01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
OBV_21190 (pcrA)
DNA repair and recombination proteins [BR:
ova03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
OBV_21190 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
OBV_21190 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_30
Motif
Other DBs
NCBI-ProteinID:
BAK99317
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All DBs
Position
complement(2013068..2015581)
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AA seq
837 aa
AA seq
DB search
MTDFNKRFLAARKAVIARDFQRLNPMQRQAAMTTEGPLLLLAGAGSGKTTVLIQRVYNLL
TYGRGSDSDEVPEYAAEEDLRFLENFPNDPEPEDRRRAIRLCAVDVPRPWEIIAITFTNK
AAGELKDRLAARLGPVANDIWASTFHSACVRILRRDIERIGFQKDFTIYDTDDSKRVLKD
IVKELNYDEKAFPPKELLGIISKSRDRYETPEDFARQYQDSGDWKMARIAKVYAKYTEKL
RAANALDFDDIIFHTVELLQKDAEVREYYQHKFRYVLVDEYQDTNHLQYLLTSLLAGGRK
NLCVVGDDDQSIYRFRGANIENILNFEKQYANARTIRLEQNYRSTQNILDAANAVIKNNQ
GRKGKTLWTDNGSGDKVSIRTNYSEADEANFVVGNILMQVNRGRRFSDCAVLYRMNAQSN
ALEYALRRNGMPYKVVGGTKFYDRAEVKDMLAYLCVLNNPLDDLRLRRIVNTPGRGIGGT
SMQKVSTVASQQGISLYEVMRNADLFPELKVPAAKLLKFADLVDGLRKLGGTLALPEFYD
AVCDQTGYVRALEEKNDMESRGRLENVQELKSSIAGFLSGNPEDPTLSGFLNEIALYTDL
DSMDGSDDCVTLMTIHSAKGLEFPSVYVVGMEDGIFPGMNSMFDEDELEEERRLCYVAMT
RAKERLTLTNARQRMLYGRTSANRPSRFLDELPEENYEWSGKPEAYIAYGEDDGGSGDSF
GGSSDGPERGFPGQFGGSAGNSSGGFGTNRSSSKVRTYRDSAAEPRFAVKKPTTAKPASE
PLMQVAQGDAVEHTAFGKGTVLSVKPMGGDALIEVAFETKGTKKLMLKSAGAHMKKI
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atgactgacttcaacaagcgcttcctcgccgcccggaaagccgtcatcgcgcgggacttc
cagcggctgaaccccatgcagcggcaggccgccatgaccaccgagggtcctctccttctg
ctggcgggagccgggtccggtaagaccaccgttctcatccagcgggtgtataaccttttg
acctacggccggggcagcgactccgacgaggtgccggagtacgccgcggaagaggacctc
cggttcctggaaaactttccgaacgatccggagccggaagaccggcggcgggccatccgg
ctgtgcgccgtggacgtgccccggccctgggaaattatcgccattacctttaccaacaag
gcagcaggcgagcttaaagaccgtctagcggcccgcctgggtccggtggcaaacgacatc
tgggcctccacgttccactccgcctgcgtccgcattctgcggcgggacatcgagcggatc
ggctttcagaaggactttaccatctacgacaccgacgactccaaacgagttctgaaggac
atcgtcaaggagctgaactacgacgaaaaggcctttcctcccaaggaactgctgggcatc
atcagcaaatcccgggaccgctatgaaacgccggaggactttgcccggcagtatcaggac
tcaggcgactggaagatggcccgtattgcaaaggtctacgcaaaatacacggaaaagctc
cgcgccgccaacgctctggactttgacgacatcattttccacaccgtggagctgctgcaa
aaggacgcggaggtacgggagtattatcagcataagttccgctacgtgctggtggacgag
tatcaggacaccaaccacttgcagtatcttttgacctctctgctggcgggcgggcgcaaa
aatctctgcgtggtgggtgatgacgaccagtccatctaccgcttccggggcgcgaatatc
gagaacatcctgaactttgaaaaacagtatgcaaacgcccgcactatccggctggagcag
aattaccgctccacccagaacattctggacgcggccaacgccgttatcaaaaacaatcag
ggccggaagggcaagaccctctggacggacaacggcagcggcgacaaagtctctatccgc
acgaattacagcgaggcggacgaggccaacttcgtggtgggcaacatcctgatgcaggtg
aaccggggacggagattttccgactgtgcggtgctctaccgcatgaatgcccagtccaac
gcgctggaatatgccctgcggcgcaacggaatgccctataaggttgtgggcggaaccaag
ttctatgaccgtgcggaagtgaaggatatgctggcctacctctgtgtgctgaacaatccg
ttggacgatctgcgcctaaggcgcatcgtcaatacgccagggcgcggcattggcggcacc
agtatgcagaaagtcagcactgttgccagccagcaaggaatttcactttacgaggtcatg
cgcaacgcagacctgtttccggaattgaaagtccctgcggcaaagctgctgaaatttgcg
gatctggtggacggcctgcgaaagctgggcggtacgctggcattgccggagttttacgac
gcagtgtgcgaccagaccggctatgtccgcgcgctggaggagaaaaacgacatggagagc
cgggggcggctcgaaaacgtgcaggaattgaagtccagcattgccggctttctgtccggc
aacccggaggaccctaccctgtccggttttttgaatgagatcgcactgtacacagacctt
gactccatggacggcagcgatgactgcgtgaccctcatgaccatccactctgcaaagggt
cttgagttccccagcgtttacgtggtgggcatggaggacggcattttccccggcatgaat
tccatgttcgacgaggacgagctggaagaggagcggcggctgtgctacgtggccatgacc
cgggccaaggagcgtctgactctgaccaacgcccgccagcgtatgctgtatggccgcacc
agcgccaaccggccctcccgttttttggacgagctgccggaggaaaactacgagtggtcc
ggaaagccagaggcctatatcgcttacggtgaggacgacggcgggagcggggacagcttc
ggcggctcatccgacggtcctgaacgcggttttcccgggcaattcggtggttccgccggg
aattcctccggcggttttggtacaaaccggagcagcagcaaggtacgtacttatcgcgac
agcgccgcggagccccgtttcgcagttaaaaagccgacgacagcaaagcccgcatccgaa
ccgctgatgcaggtggctcaaggcgacgcggtagaacacaccgctttcggcaagggcacg
gtgctgtccgtgaaacccatgggcggcgacgcgctgatcgaagtggcctttgaaacaaag
ggcactaaaaagctgatgttgaaatccgcaggggcgcatatgaaaaaaatctga
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