Oscillibacter valericigenes: OBV_23430
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Entry
OBV_23430 CDS
T01636
Symbol
ispH_rpsA
Name
(GenBank) 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/putative 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
K03527
4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:
1.17.7.4
]
Organism
ova
Oscillibacter valericigenes
Pathway
ova00900
Terpenoid backbone biosynthesis
ova01100
Metabolic pathways
ova01110
Biosynthesis of secondary metabolites
ova03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
ova00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
OBV_23430 (ispH_rpsA)
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
OBV_23430 (ispH_rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
ova03011
]
OBV_23430 (ispH_rpsA)
Enzymes [BR:
ova01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.7 With an iron-sulfur protein as acceptor
1.17.7.4 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase
OBV_23430 (ispH_rpsA)
Ribosome [BR:
ova03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
OBV_23430 (ispH_rpsA)
Bacteria
OBV_23430 (ispH_rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LYTB
S1
S1_RRP5
Spt6_S1
OB_RRP5_4th
DUF2110
Metallophos_2
Beta-prop_WDR3_1st
Motif
Other DBs
NCBI-ProteinID:
BAK99541
LinkDB
All DBs
Position
complement(2222220..2224190)
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AA seq
656 aa
AA seq
DB search
MRVILAESAGFCYGVERAVELAKKTAVESGGCVMLGDLIHNAHVIAELEALGVRKVNAPE
DVMDGETVVLRSHGERREVLEALKKRNIRWVSAACPNVQRIQTLAAQAEEAGRQVIIIGE
THHPEILGIASYCSHPMIFGGPAEVWAWLKEEPGRRNTPVTVVAQTTCIRKLFETSAKIL
KKECTNAKIFDTICNATHRRQSEAADIAERVDVMVVVGDRRSANTKHLTEICIERCPCVL
QIERSDELSPDFFNGCSVAGLTAGASTPAGIIKEVYATMSEEIKTAEGGEESFEELLNQS
FKTLNTGEKVTGIVTAIGPTEVQVDVGAKQAAYIKASELSNDPNVKPEDILKVGDEIEAY
IVRVNDVEGYAELSKKRLDAVKVWENIEQAVEDKTVMEGNVTEVNKGGIVVSVKGVRVFV
PASQSGMPRGANLETMVKSNVQLRITEVNRARRRVVGSIRSVLDEARKAAQEEVWNNIEV
GKRYTGTVKSMTAYGVFVDIGGVDGMVHISELSWSRIKTPSEVCKVGDTLEVYVISFDPE
KHKISLGVKDRSINPWDVFMGKYQVGDVAKVRIVKLMTFGAFAEVVPGVDGLIHISQIAD
RRIEKPGDVLSEGQEVDAEIIAVDEEKKKISLSIRALLTPAAEEGASSEDAPEDAE
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgcgagtgattctggccgaaagcgccggcttttgctacggtgtggaacgggcggtggag
ttggcaaagaaaaccgccgtcgagagcggcggatgcgtcatgctgggggacctgatccac
aacgcccatgtgattgcggagctggaggccctgggtgtgcggaaggtcaacgcgccggag
gacgtgatggatggggagactgtggtgctccgctcccacggggagcgaagggaggtgctg
gaggcgctgaaaaagcgcaatatccgctgggtcagtgccgcctgccccaatgtacagcgc
atacaaacccttgcggcgcaggcggaagaagcgggtcgtcaggttattattatcggggag
acgcaccaccccgaaatccttggtatagccagctattgctctcatccgatgattttcggc
ggaccggcggaggtctgggcatggcttaaggaggaacccggaaggcggaacacacctgtt
acagtggtggcgcagaccacctgtattcgtaaactttttgaaacttctgcaaaaatatta
aaaaaagagtgtacaaacgcgaaaatatttgatacaatatgcaatgctacgcataggcgt
caatccgaggcggcggatattgccgaacgggtggacgtgatggtggtggtgggagaccgc
agaagtgcaaacaccaaacatttgacggaaatttgtattgagagatgcccgtgcgtcctt
caaattgaaaggtcggacgagctctcgccggattttttcaatggttgctctgttgcaggt
ttgacggccggcgcctccacgcccgcgggcatcattaaggaggtatatgcaacgatgagt
gaagaaatcaagaccgccgaaggcggagaggagtccttcgaagaactgctgaatcaatct
tttaagactttaaatacaggggaaaaggtaaccggcatcgtcacggccatcggtccgacg
gaggttcaggtggacgtgggtgcgaagcaggctgcgtacattaaggccagtgagctgagc
aacgatcccaacgtcaaacccgaggatattctgaaggtcggcgacgagattgaggcctat
atcgtccgcgtcaacgacgtggagggttacgcggagctttccaaaaagcgcctggatgcc
gtcaaggtctgggagaatattgagcaggccgtcgaggacaagaccgtcatggaaggaaac
gtcaccgaggtcaacaagggcggtatcgtggtatccgtcaagggcgtgcgcgtgttcgtg
cccgcttctcagagcggtatgccccggggcgccaatctggagactatggtgaagtccaac
gttcagctgcgcatcaccgaggtcaaccgtgcccgccgccgtgtggtgggttctattcgt
tccgtgctggatgaggcccgcaaggccgctcaggaggaagtctggaacaacatcgaggtc
ggaaagcgctataccggtaccgtgaagtccatgaccgcatatggcgtgtttgtggacatc
ggcggtgtggacggtatggtacatatctccgaactgagttggagccgcatcaagaccccc
tccgaggtctgcaaggtgggcgatactctggaggtatatgtcatttccttcgatcccgaa
aagcacaagatctctctgggcgtgaaggaccgcagcatcaacccctgggacgtgttcatg
ggcaagtatcaggtgggcgacgtggcaaaggtccgtattgtcaagttgatgactttcggt
gcatttgccgaggttgtccccggtgtagacggcttgatccacatctcccagatcgccgac
cggcgtattgaaaagcccggtgatgtgctgagcgagggtcaggaagtggatgccgagatt
atcgctgtggatgaggagaagaagaagatctccctgtctatccgtgccctgctgacgccg
gctgctgaagagggcgcttcttccgaggatgctccggaagacgctgagtaa
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