KEGG   Oscillibacter valericigenes: OBV_28450
Entry
OBV_28450         CDS       T01636                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
ova  Oscillibacter valericigenes
Pathway
ova03030  DNA replication
ova03410  Base excision repair
ova03420  Nucleotide excision repair
ova03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ova00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    OBV_28450 (polA)
   03410 Base excision repair
    OBV_28450 (polA)
   03420 Nucleotide excision repair
    OBV_28450 (polA)
   03440 Homologous recombination
    OBV_28450 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ova03032]
    OBV_28450 (polA)
   03400 DNA repair and recombination proteins [BR:ova03400]
    OBV_28450 (polA)
Enzymes [BR:ova01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     OBV_28450 (polA)
DNA replication proteins [BR:ova03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     OBV_28450 (polA)
DNA repair and recombination proteins [BR:ova03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     OBV_28450 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     OBV_28450 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_polI_exo1 HHH_2 HHH_5
Other DBs
NCBI-ProteinID: BAL00044
LinkDB
Position
2678205..2680859
AA seq 884 aa
MKLMAIDGNSILNRAYYGIRPLSTRDGLYTHAIYGFLTTLLRLRDEEQPDAVCVAFDLHA
PTFRHKADESYKATRKPMPEELRMQVPVLKEVLDALNIPRYEAEGWEADDWLGTISRRCE
AEGWDCVVVTGDKDSLQLITEKTKVKLVSTRMGQTTTKDMTPESFREQYGFDPIHMIDLK
ALMGDSSDNIPGVPGVGEKTAMDLIQKYGSIDTIYEKLPDIEAKPAAIKKLTEGEESARH
SYWLATIVTDAPLDFNPEVNAVKAPGPDAYSLFLKLEFSKLIERFDLRQGAPALAESERI
SVAASVEQVTSAAKAGELLELWRNADHISLLALPDLSGVAVYCATGGDTAVMSELFFDRY
QGNWNHLLASLFSGDIKKVSHNVKDLMRLLLLNNLPAEGFIFDTALAAYLLDATAGSYDL
GRLFVSYFNEELPKPLYLDPDAFALLGDRAAAEASFDSCATAVDALYDALAPKLRERGQQ
ELFETIELPLCRCLAEMELAGCRVDAKALSDFGELLSRRAKDLEAKIYHLADGEFNINSP
KQLGEILFDRLGLPHGKKTKTGWSTNADVLEKLRWESPIVDAVLEYRQLTKLKSTYADGL
LKALDPDGRVRTSFQMTVTATGRLSSTEPNLQNIPTRTDLGSEIRKMFVPEPGNVLVDAD
YSQIELRLLAHISGDEGMRAAFLSGGDFHAETASKVFGVAREDVTHEMRRRAKAVNFGIV
YGISAFSLGQDIGVSQKEAKAYMDAYFATFPGVRSYMDRVVEQAKADGYVETLYHRRRDL
PELASSNFNLRSFGQRVALNMPIQGTAADIMKLAMIAVWKRLKSELPRAKLVLQVHDELI
VECPEGDARRAAVLLAEEMEGVAHLSVPLTADAYWGKNWLEAKG
NT seq 2655 nt   +upstreamnt  +downstreamnt
atgaagctcatggccatcgacggcaacagtattttgaatcgcgcctattacggcatccgc
cccctcagcacccgggacgggctttacacccacgctatctacggctttttgaccacgctt
ttacgcctgcgggacgaggagcagcccgacgccgtgtgcgtcgccttcgaccttcacgcc
cccaccttccgccacaaggcggacgagagctacaaggccacccgaaagcccatgccggag
gagctgaggatgcaggtaccggttttgaaggaggtactggacgccctgaacattccccgc
tacgaagcggagggctgggaagccgacgactggctgggtaccatctcccgcagatgcgag
gccgagggctgggactgtgtggtagtaacgggagacaaggattcccttcagctcatcaca
gaaaaaacaaaagtgaagcttgtctccacccgcatgggccagaccacgaccaaggacatg
acgccggagtcttttcgggagcaatacggttttgaccccatccacatgattgacctgaag
gcgctgatgggcgacagctccgacaacattccaggtgtccccggcgtaggggaaaagacc
gccatggacctgatccaaaaatacggctccatcgatacgatctatgaaaagctgccggac
atcgaggcgaagcccgccgctattaaaaagttgacggagggggaagaatccgcccggcac
tcctattggctggccactatcgtaaccgatgcaccgctggactttaacccggaagtcaat
gcggtaaaagcccccggcccggatgcctattccctgtttttgaagctggaattttccaag
ctgatcgagcggtttgacctccggcagggcgcccccgccttagcagagagcgagcgtatc
tccgtcgccgcctcggtggagcaggtgacgagcgccgctaaggcaggggagctgctggaa
ctgtggcgcaatgccgaccatatctccctgctggcgctgcccgatctctccggagtagcc
gtgtactgcgccaccggaggcgataccgcggttatgtcggagctgtttttcgaccgctac
caggggaattggaaccatcttcttgcctctttgttctccggggacatcaaaaaagtctct
cataatgtaaaggacctgatgcggcttctgcttttaaacaaccttcccgccgagggcttc
atcttcgacacggcgctggctgcctatctgctggacgccactgccgggagttacgacctg
gggcggttgttcgtctcctatttcaatgaggagctgcccaaacccttgtatctggacccg
gacgcctttgctctgttgggcgaccgggccgcggcagaggcgtcttttgacagctgcgcc
accgccgtggacgcgctgtatgacgcgctggccccaaagctgcgggagcggggacagcag
gaattgtttgagaccatcgagttgccgttgtgccgctgtcttgcggagatggaactggcc
ggttgtcgggtggacgccaaagctctgtccgatttcggagagttgctgagccgccgcgca
aaagatctggaggcaaaaatctaccatctggccgacggcgagtttaatatcaactccccc
aagcaattgggcgagattttgttcgaccggctgggtctgccccacggaaagaagacgaaa
accggctggtccaccaatgcggacgtactggaaaagctgcggtgggagagccccattgtg
gacgcggtgttggagtaccgccagctcaccaagctgaaatccacctatgccgacgggctt
ttgaaagccctggacccggatggcagggtccgcaccagctttcagatgaccgtcaccgcc
accgggcgtctctcctccacggaacccaatctgcaaaatatccccacccggacggacctt
ggcagcgagatccggaaaatgtttgtgcccgaacccggaaacgtgctggtggacgcggac
tactcccagattgagctgcggcttctggcccatatctccggcgacgaggggatgcgcgcc
gcttttctctccggcggcgacttccatgcggaaaccgcctccaaggtctttggcgtggcc
cgggaggatgtaactcacgagatgcgccgccgggccaaggccgtcaacttcggcattgtg
tacggcatctcggccttctccctggggcaggacatcggcgtgagccaaaaagaggcaaag
gcctatatggacgcatattttgccaccttccccggcgtccggtcctatatggaccgcgtg
gtggagcaggccaaagcggatgggtacgtggagaccctgtaccatcgccgccgtgacctt
ccggaactcgcctccagcaatttcaacctccgctccttcggccagcgtgtagcgctgaat
atgcccattcagggtacggcggcggacatcatgaaactggccatgattgcggtgtggaag
cgcctgaaatcagagctgccccgggcaaagctggttcttcaggtccacgacgagctgatt
gttgagtgtccggaaggagatgcgcggcgggccgccgttttgctggcggaggagatggag
ggcgtggcccatctgtccgtccctttgaccgccgacgcctattggggaaaaaactggctg
gaagccaaaggctga

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