Oscillibacter valericigenes: OBV_40360
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Entry
OBV_40360 CDS
T01636
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ova
Oscillibacter valericigenes
Brite
KEGG Orthology (KO) [BR:
ova00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ova03016
]
OBV_40360 (truB)
Enzymes [BR:
ova01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
OBV_40360 (truB)
Transfer RNA biogenesis [BR:
ova03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
OBV_40360 (truB)
Prokaryotic type
OBV_40360 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
BAL01235
LinkDB
All DBs
Position
complement(3796281..3797147)
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AA seq
288 aa
AA seq
DB search
MPNGIIIIDKPADWTSMDVCAKLRGILREKRVGHSGTLDPMATGVLPVFVGQATRAVEFA
ESGKKEYVAGLRLGLVTDTQDVTGTTIETREAEVSREMLAAVLPQFTGDIQQLPPMYSAI
KIHGRKLCDVARKGGEVERKPRGITIYELEILGQAGPADFTLRCVCSKGTYIRTLCHDIG
RALGCGGCMASLRRTMAAGFTLSQAVSIQDVQERGEALLLPTDQYFANYPAYTIAAEQQE
RRCRNGNPVDAPDCPDGTYRVYGRGGEFLCLSRAANGVLTSIKNFFGA
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgcccaacggaatcatcatcatcgacaagcccgcggactggaccagcatggatgtatgt
gcgaagctccgcggtatcctgcgggaaaaacgggtgggccacagcggaacactggacccc
atggccaccggcgtcctgcccgtctttgtgggacaggccacccgggcggtggagtttgcg
gagagcgggaaaaaagagtacgtggcgggacttcggctggggctggtcaccgacacgcag
gacgtgaccggaaccacgatcgagacccgcgaggcagaggtctcacgggagatgctggcg
gctgttctgccccaatttacgggggacattcagcagcttccgcccatgtactccgccatt
aaaattcacggcagaaagctgtgcgacgtggcccgaaagggcggcgaggtggagcggaag
ccccggggcatcaccatctatgagctggaaattctgggacaggctggtcctgccgacttt
actctgcggtgcgtttgctccaagggtacctatatccgtacgctttgccacgacatcggc
cgggcgctgggctgcggcggatgcatggcgtctctgcggcggaccatggcggccggattc
acgctttcccaggcagtgagtatccaggatgtgcaggagcggggcgaagcgctgttgctg
ccgacagaccagtattttgctaattatcccgcctacacgattgccgcagagcagcaggag
aggcgctgtcggaacggaaatccagtggatgcccccgactgtccggacgggacataccgc
gtttatggacgcggaggcgagttcctctgcctctcaagggcggcaaacggcgtattgacg
tctataaagaatttttttggagcgtaa
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