Oscillibacter valericigenes: OBV_p-00520
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Entry
OBV_p-00520 CDS
T01636
Symbol
hup
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
ova
Oscillibacter valericigenes
Brite
KEGG Orthology (KO) [BR:
ova00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ova03032
]
OBV_p-00520 (hup)
03036 Chromosome and associated proteins [BR:
ova03036
]
OBV_p-00520 (hup)
03400 DNA repair and recombination proteins [BR:
ova03400
]
OBV_p-00520 (hup)
DNA replication proteins [BR:
ova03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
OBV_p-00520 (hup)
Chromosome and associated proteins [BR:
ova03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
OBV_p-00520 (hup)
DNA repair and recombination proteins [BR:
ova03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
OBV_p-00520 (hup)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_bac_2
HU-DNA_bdg
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
BAL01907
LinkDB
All DBs
Position
pOBV01:50697..50978
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AA seq
93 aa
AA seq
DB search
MQKTDFINELARKTGLSKKDIVAVVEAYSSTVTEVLQSGDSLSLKGFGTFKPARHKARIG
RNPKTKEPMEIAAYVSPSFKPSKVLKDAMKSET
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaaccgattttatcaatgaacttgcccgcaaaaccgggctttccaaaaaagat
attgtcgctgttgttgaagcgtattcttcaaccgttacagaagttcttcaatctggcgat
agtctctctttgaaaggctttggaacgtttaaacccgccagacataaggcgcgtataggg
cgtaatccaaagacgaaagaaccaatggagatagctgcatatgtttcaccatcgtttaag
ccgtcaaaagttcttaaagatgctatgaaatctgaaacataa
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