Oxalobacter vibrioformis: NB640_01010
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Entry
NB640_01010 CDS
T08675
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ovb
Oxalobacter vibrioformis
Pathway
ovb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ovb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NB640_01010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ovb03400
]
NB640_01010
Enzymes [BR:
ovb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
NB640_01010
DNA repair and recombination proteins [BR:
ovb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NB640_01010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
WAW10278
UniProt:
A0A9E9LZW4
LinkDB
All DBs
Position
complement(189270..190100)
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AA seq
276 aa
AA seq
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MSSLKSRARILEEMGIGPEWQLRGRAAAPESVPETVTVTLDEPSPVSRAETAPDPLAGPE
PGSDAWLAPTYPSEILPEPQDIASWEALVETIRGCTRCTLCETRTNTVPGVGDTSAEWLF
IGEGPGYHEDQQGEPFVGRSGMLLDNMMAALGIKRGSNAYIANIVKCRASDERKKDRPPT
EEEAAMCMPYLQWQIANIRPKVIIALGKTAAVGLLNTDRDITMAAMRGKVHRLPVAGSEV
PLIVTYHPAYLLRTPMAKKQAWADLCLAMETIDTAG
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcttaaagagcagggcgcgcatcttagaggaaatgggtattggcccggagtgg
caactgcgcggcagggcagccgcacccgaatccgtccctgaaaccgtcaccgtcacactc
gatgaaccatcacccgtttcccgggcggaaacagcccctgatcccctggcaggtcctgag
ccggggtctgatgcctggctggcgccaacatacccttccgagatcctgcctgagccacag
gacattgccagttgggaagcgctggttgagacaatccggggctgcacccgctgtaccctg
tgcgaaacgcggaccaataccgtgcccggtgtgggcgataccagtgctgaatggctcttt
atcggcgaaggtcccggctaccatgaagaccagcagggcgagcccttcgtgggccgctcc
ggcatgctgctggacaacatgatggctgcgctgggcatcaaacggggcagcaacgcctac
atcgccaacatcgtcaaatgccgcgccagcgacgagcgcaaaaaggacaggccgcccacc
gaggaagaggccgccatgtgcatgccgtatctccagtggcagatcgcgaatatcaggccc
aaagtcatcatcgccctgggcaagacagctgccgttggccttttgaacaccgaccgcgac
atcaccatggctgccatgcgcggtaaagtacaccgtttgcctgtggctggcagcgaagtg
ccactgattgtcacctaccatcccgcatacctcctgcgcactccgatggccaaaaagcag
gcctgggctgatctgtgcctggcgatggaaaccatcgacacggccggctga
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