Oxalobacter vibrioformis: NB640_02540
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Entry
NB640_02540 CDS
T08675
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
ovb
Oxalobacter vibrioformis
Pathway
ovb00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ovb00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
NB640_02540 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ovb01007
]
NB640_02540 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ovb03016
]
NB640_02540 (lysS)
Enzymes [BR:
ovb01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
NB640_02540 (lysS)
Amino acid related enzymes [BR:
ovb01007
]
Aminoacyl-tRNA synthetase
Class II (A)
NB640_02540 (lysS)
Transfer RNA biogenesis [BR:
ovb03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
NB640_02540 (lysS)
Prokaryotic type
Other AARSs
NB640_02540 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
WAW10556
UniProt:
A0A9E9LY93
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All DBs
Position
503522..505081
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AA seq
519 aa
AA seq
DB search
MTSQNKPSAAAEGEEAQSAAPAADENSIIAERRNKLAAIRQQGVAFPNDFSPKNKAADLH
EKYDGKDKEALESEAIHVSVAGRMMLKRVMGKASFATLMDASGSLSDGRIQLFITDGTTG
HEAHEAFKHYDIGDILGAEGTLFKTKTGELSVRVSNLRLLTKSLRPLPDKFHGLVDQEIK
YRQRYVDLIMNEETRQTFKARTAAISSIRHFMEQHGFMEVETPMLQAIPGGAAAKPFITH
HNALDMQMFMRIAPELYLKRLLVGGFERVFEINRNFRNEGVSPRHNPEFTMMEYYAAYVD
YQWLMDFTEAIIRQAVIDAHGTPILNYQDREIDFSKPFERLTIIEAINKYAPQYTTEQLH
DVTFLQKELLTFGVKPFTGAGTGALQLALFEETAEAQLWNPCYIIDYPVEVSPLARASDT
REGITERFELFIAGREIANGFSELNDAEDQAARFMAQVEAKNAGDEEAMYYDADFVRALE
YGMPPAGGCGIGIDRLIMLITDSPNIRDVILFPHMRRED
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgacatcgcaaaacaaaccgtccgcagcagcagaaggagaagaggcgcaatccgccgct
cctgcagctgatgaaaactcgatcatcgcagaacgccgcaacaaactggctgccatcagg
cagcagggagtggcatttcccaatgacttcagccccaaaaacaaggctgcggatctgcat
gaaaagtatgacggcaaggacaaggaggcgctggaatccgaagccattcacgtcagtgtg
gccgggcgcatgatgttaaaacgcgtgatggggaaagcgtcttttgcaacactgatggat
gcatccggttcactgtcagatggccgcatccagcttttcattaccgatggcacaaccggc
catgaggcgcacgaggctttcaagcattacgatatcggcgacattctgggcgcggaaggc
acccttttcaaaaccaagaccggcgagctttcggtccgggtgagcaatctgcgcctcctg
accaagtcgctccgcccgcttcccgacaagttccacggtctggttgaccaggaaatcaag
taccgccagcgttatgtcgatctcatcatgaatgaggagacgcggcagacattcaaggcc
agaacggcagccatatcctccatccgccatttcatggagcagcatggttttatggaagtc
gaaaccccgatgctccaggccatccccggtggtgcggctgccaagcctttcattacccac
cacaatgcgctcgatatgcagatgttcatgcggattgccccggaactctacctgaaacgc
ctgcttgttggcggattcgagcgggtatttgaaatcaaccgcaacttccgcaatgaaggc
gtctccccgcgtcataatccggaattcaccatgatggaatactatgccgcctatgtggat
taccaatggctgatggactttaccgaagccatcatccgccaggcagtgattgacgcgcac
ggtacccccatcctgaattaccaggaccgggaaattgatttttcaaaaccttttgagcgc
ctcaccattattgaagccatcaacaagtatgcaccacaatacacgaccgagcagctccat
gatgtcaccttccttcagaaagaactcctgacattcggcgtcaagccatttaccggtgca
ggcactggtgccctgcaactggcgctttttgaggaaacagcagaagcccagctgtggaat
ccctgctatatcatcgactatcctgtcgaagtctctccacttgcaagagcatctgatacc
cgggaaggtatcaccgagcgttttgaactctttattgcaggacgtgaaattgccaatggc
ttttcagaattgaatgacgcggaagaccaggcggcccgtttcatggcacaggtcgaggca
aaaaatgcgggtgatgaagaagccatgtactacgacgccgattttgtacgtgcccttgaa
tacggcatgccgcctgccggcggctgcggcatcggtatcgatcgcctgatcatgctgatc
accgattcgccgaatattcgtgatgttattctctttccgcacatgagacgggaagattaa
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