Oxalobacter vibrioformis: NB640_03905
Help
Entry
NB640_03905 CDS
T08675
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
ovb
Oxalobacter vibrioformis
Brite
KEGG Orthology (KO) [BR:
ovb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ovb03016
]
NB640_03905 (truA)
Enzymes [BR:
ovb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
NB640_03905 (truA)
Transfer RNA biogenesis [BR:
ovb03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NB640_03905 (truA)
Prokaryotic type
NB640_03905 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
WAW10800
UniProt:
A0A9E9P407
LinkDB
All DBs
Position
complement(780399..781193)
Genome browser
AA seq
264 aa
AA seq
DB search
MKRIALGIEYDGSRWRGWQKQPDGHTVQNQLEDALYRFTRTRISTACAGRTDAGVHALEQ
VVHLDTEIDRDTFSWVRGVNSFLDDSIAVRWACEVPYGADGFHARASAIARRYRYVLYNN
PIRSPLLRKRAGWIFRPLSLAPMQEAASYLLGEHDFSAFRAAECQAPSPVKTMNHIGIEQ
QGDLFVFTFEASAFLHHMVRNIVGSLVYVGKGDYDPDWLNVLLLGRERKKAAPTFMPDGL
YLAKVIYDKQWNLPQAADAFIPIV
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgaatcgcgctgggtattgaatatgatggcagcaggtggcgtggctggcagaaa
cagcctgatggacacaccgtccagaaccagctggaagatgccctttaccggtttacgcgt
acgcgtatttccactgcctgcgcaggccggacagatgcgggagtgcatgcgcttgaacag
gttgtccatctcgataccgaaatcgatcgtgacaccttttcctgggtaaggggcgtcaat
tcctttctggatgattccattgcagtacgatgggcctgcgaagtgccttatggggctgat
ggttttcatgcacgtgccagtgcgattgcccgcaggtatcgttatgtgctgtataacaat
ccgatccgttcccctttattgagaaaacgggcaggatggatatttcgtcccctgtcgctg
gcgcccatgcaagaagctgccagctatcttctcggagagcatgatttctccgctttcagg
gcagcggaatgccaggctccctcaccggtcaagaccatgaatcacatcggcattgagcag
cagggcgatctgtttgtatttaccttcgaggccagtgcttttctgcaccatatggtgcgt
aatattgtcggctcgcttgtgtatgtgggcaagggcgattacgatccggattggctcaat
gtgctgttgctaggccgcgagcgcaaaaaagccgcgccgacctttatgcccgatggcctg
tatctggccaaagtgatatacgataagcaatggaacctgcctcaggcagccgatgcgttt
attccgattgtgtaa
DBGET
integrated database retrieval system
