KEGG   Oxalobacter vibrioformis: NB640_04215
Entry
NB640_04215       CDS       T08675                                 
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
  KO
K03092  RNA polymerase sigma-54 factor
Organism
ovb  Oxalobacter vibrioformis
Pathway
ovb02020  Two-component system
ovb02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:ovb00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    NB640_04215 (rpoN)
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    NB640_04215 (rpoN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ovb03021]
    NB640_04215 (rpoN)
Transcription machinery [BR:ovb03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     NB640_04215 (rpoN)
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID DUF6915
Other DBs
NCBI-ProteinID: WAW10858
UniProt: A0A9E9P494
LinkDB
Position
849113..850534
AA seq 473 aa
MKLKQQSRLTQQLALTPRLQRAIRLLQLSATSLNLEIEKALEDNPFLERVDNLLDSALHL
TADDTLISNESAANRVTIDSEAPADGSLDFRSPSHTAQVPNNDDMASPMEAPSPSLREHL
TTQIHMRLNEQRQLALAELIIDALDENGFLIETLDEMLEWLPEALNIQRSELETALRQVQ
DLEPPGIAARNSVECLAIQLKKLPGLPYVTRKRAITIVENHLPLLARRDFSRLKKLLDCD
DEDLTDARKAIHSCDPHPAASFSAEKAHTLVPELLAFYQDGQWQIGLNPAALPKIRISSL
YADIMKNAENRQTMNTQLQEANWFIRNLQQRYETILKTGQAIAERQQPFFSDGPISMRPL
VLHEIADTLELHESTISRVTNQKYMHTPHGIVELKSFFGSHLTTESGNTVSSTAIRERIR
QLIGAEDQKKPLSDNRIAQILGEQGLVIARRTVAKYRETLKIPSAHMRKSLSL
NT seq 1422 nt   +upstreamnt  +downstreamnt
atgaaactgaaacagcaatcccgccttacacagcaacttgcgctcactccccgtctacag
cgcgccatccggcttttacagctgtcagccaccagcctcaacctggaaattgaaaaggcg
ctggaagataatccgtttctggaacgcgtggacaacctgctggacagtgcactgcatctc
accgcggatgacacacttatcagcaacgaatctgccgcaaatcgggtaacaattgatagc
gaagcgccggctgatgggtctctggacttccggagcccgtcccataccgcacaggttcct
aataatgacgatatggcttccccgatggaagccccatccccttctctgcgagagcatctg
acaacccagatacacatgcgtttgaatgagcagcgtcagttggctctggctgagctgatt
attgatgcgctggatgaaaacggcttcctcattgagacgcttgacgagatgcttgagtgg
ctacctgaagcgctcaatatccagcggtccgagctggaaacggccttaaggcaagtgcag
gatctcgagcctcccggcattgcggcaagaaacagcgtcgaatgcctcgctatccagttg
aaaaaactgccgggactgccttatgtcacgcgtaaaagagccattacgattgttgaaaat
catctgcctcttttggcccgacgggatttttcccggctgaagaagctgctggattgcgat
gatgaagatctgacagatgcccgaaaagccatccattcctgtgatccgcatcctgcagca
tccttttctgctgaaaaagcccataccctggtgccggaactgctggccttttatcaggat
ggccagtggcaaatcggactgaatccggcagccctgccaaagatccgcatcagctccctg
tatgccgacatcatgaaaaatgcggaaaaccgccaaaccatgaatacacagttacaggaa
gcaaactggtttatccgcaacctgcagcagcgttatgagaccattctcaaaacaggacag
gccattgcggaaagacagcagccgttcttttctgatggccccatatcgatgaggccactt
gtattgcacgaaatagctgatacactagaactgcacgagagcacgatttcccgtgtgaca
aaccagaaatacatgcacacgccgcatggtatagttgaactgaagtcctttttcggaagc
catctgacaacggaatcaggcaacaccgtttcatcaacagccattcgggaacgaatccgg
caacttataggagcagaagaccagaaaaaacccttatcagacaaccgaatcgcacagata
ctgggagaacagggattggtgattgcccgtcgaaccgtcgcgaaataccgcgaaaccctg
aaaattccttccgctcatatgcgaaagtctctgtctctgtaa

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