Oxalobacter vibrioformis: NB640_04215
Help
Entry
NB640_04215 CDS
T08675
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
ovb
Oxalobacter vibrioformis
Pathway
ovb02020
Two-component system
ovb02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ovb00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NB640_04215 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
NB640_04215 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ovb03021
]
NB640_04215 (rpoN)
Transcription machinery [BR:
ovb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NB640_04215 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
DUF6915
Motif
Other DBs
NCBI-ProteinID:
WAW10858
UniProt:
A0A9E9P494
LinkDB
All DBs
Position
849113..850534
Genome browser
AA seq
473 aa
AA seq
DB search
MKLKQQSRLTQQLALTPRLQRAIRLLQLSATSLNLEIEKALEDNPFLERVDNLLDSALHL
TADDTLISNESAANRVTIDSEAPADGSLDFRSPSHTAQVPNNDDMASPMEAPSPSLREHL
TTQIHMRLNEQRQLALAELIIDALDENGFLIETLDEMLEWLPEALNIQRSELETALRQVQ
DLEPPGIAARNSVECLAIQLKKLPGLPYVTRKRAITIVENHLPLLARRDFSRLKKLLDCD
DEDLTDARKAIHSCDPHPAASFSAEKAHTLVPELLAFYQDGQWQIGLNPAALPKIRISSL
YADIMKNAENRQTMNTQLQEANWFIRNLQQRYETILKTGQAIAERQQPFFSDGPISMRPL
VLHEIADTLELHESTISRVTNQKYMHTPHGIVELKSFFGSHLTTESGNTVSSTAIRERIR
QLIGAEDQKKPLSDNRIAQILGEQGLVIARRTVAKYRETLKIPSAHMRKSLSL
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgaaacagcaatcccgccttacacagcaacttgcgctcactccccgtctacag
cgcgccatccggcttttacagctgtcagccaccagcctcaacctggaaattgaaaaggcg
ctggaagataatccgtttctggaacgcgtggacaacctgctggacagtgcactgcatctc
accgcggatgacacacttatcagcaacgaatctgccgcaaatcgggtaacaattgatagc
gaagcgccggctgatgggtctctggacttccggagcccgtcccataccgcacaggttcct
aataatgacgatatggcttccccgatggaagccccatccccttctctgcgagagcatctg
acaacccagatacacatgcgtttgaatgagcagcgtcagttggctctggctgagctgatt
attgatgcgctggatgaaaacggcttcctcattgagacgcttgacgagatgcttgagtgg
ctacctgaagcgctcaatatccagcggtccgagctggaaacggccttaaggcaagtgcag
gatctcgagcctcccggcattgcggcaagaaacagcgtcgaatgcctcgctatccagttg
aaaaaactgccgggactgccttatgtcacgcgtaaaagagccattacgattgttgaaaat
catctgcctcttttggcccgacgggatttttcccggctgaagaagctgctggattgcgat
gatgaagatctgacagatgcccgaaaagccatccattcctgtgatccgcatcctgcagca
tccttttctgctgaaaaagcccataccctggtgccggaactgctggccttttatcaggat
ggccagtggcaaatcggactgaatccggcagccctgccaaagatccgcatcagctccctg
tatgccgacatcatgaaaaatgcggaaaaccgccaaaccatgaatacacagttacaggaa
gcaaactggtttatccgcaacctgcagcagcgttatgagaccattctcaaaacaggacag
gccattgcggaaagacagcagccgttcttttctgatggccccatatcgatgaggccactt
gtattgcacgaaatagctgatacactagaactgcacgagagcacgatttcccgtgtgaca
aaccagaaatacatgcacacgccgcatggtatagttgaactgaagtcctttttcggaagc
catctgacaacggaatcaggcaacaccgtttcatcaacagccattcgggaacgaatccgg
caacttataggagcagaagaccagaaaaaacccttatcagacaaccgaatcgcacagata
ctgggagaacagggattggtgattgcccgtcgaaccgtcgcgaaataccgcgaaaccctg
aaaattccttccgctcatatgcgaaagtctctgtctctgtaa
DBGET
integrated database retrieval system