Oxalobacter vibrioformis: NB640_04895
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Entry
NB640_04895 CDS
T08675
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
ovb
Oxalobacter vibrioformis
Pathway
ovb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ovb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NB640_04895 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ovb03019
]
NB640_04895 (pcnB)
Enzymes [BR:
ovb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
NB640_04895 (pcnB)
Messenger RNA biogenesis [BR:
ovb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
NB640_04895 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Gad2
Motif
Other DBs
NCBI-ProteinID:
WAW10975
UniProt:
A0A9E9M0G7
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All DBs
Position
979039..980415
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AA seq
458 aa
AA seq
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MIKKIIRKILGREKKAPPLSHPAVLQRKEHGIDPRLLSSNAARVIHILEKAGYEAYIVGG
AVRDLLLGIQPKDFDVATNATPEQVRRLFRRAFLIGRRFQIVHVMFGHDLIEVTTFRGTT
SASAIKDEAGRLLRDNTFGTQQEDALRRDFTVNAMYYNPTHQTLHDFHGGTGDLKKRVLR
IIGDPAERFREDPVRMLRIVRFAAKLDFTIDPDTRKPIPLLAPLINNVPSARLFDEMLKL
LMSGHAMACLQELRHQGLHHGLLPLLDVVLEQPKGARFVELALGRTDQRIREEKPVSPGF
IFAALLWTQVSEKWEQYRSRGEYPIPALHSAANDIFETQTEKLALQRRIISDMRDIWALQ
PRLERRTGRTAYKLIEHDRFRAAYDFLLLRCEAGEIDPEIGEWWTRFINADGPTREELLK
IKFNSASEPAKRKRKRGGTRRRQKPASSNTPGSIEPAA
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgattaagaaaataatccggaagattctgggaagagaaaaaaaggctcctcccctttct
catcccgctgtcctgcagcgcaaggagcatggtattgatccacgcctgctttcatccaat
gctgcgcgcgttatccatattctggaaaaggccggttatgaggcctatattgtcggcggt
gctgtgcgcgaccttttgcttggtatccagcccaaggatttcgacgtcgcaaccaacgcg
acacccgaacaggtcaggcggcttttccggcgcgcattcctcattggccgtcgcttccag
attgtccacgtgatgttcggccatgatctgattgaagtgacaacctttcgcggtacaact
tctgcctcagccatcaaggacgaagcaggccgactgctgagagacaacacattcggcaca
cagcaggaagacgcactgcgccgggatttcacggtcaatgccatgtattacaacccgaca
caccagaccctgcatgattttcacgggggaacaggcgatctgaaaaaacgggtactgcga
atcattggcgatccagccgaacgctttcgtgaagatcctgtccggatgcttcgcatcgtc
cgctttgccgccaaactcgatttcaccattgatccggataccagaaaacccatccccctg
cttgccccactaatcaacaatgtcccttcggcccggctgtttgatgaaatgctcaagctt
ttgatgagcggccatgccatggcctgcctgcaggaattacggcatcagggactgcatcac
ggattgcttccgcttctggatgtcgtgctggaacaacccaaaggtgcccgttttgtcgaa
cttgcgctgggaagaaccgatcagcgcattcgtgaagaaaaaccggtctctcccggattc
atttttgccgcactgctttggacacaggtatcggaaaaatgggaacagtaccgttcacgc
ggggaataccctatccctgccctccattcagccgctaatgacatttttgaaacacagacg
gaaaagctggcgctgcagcgccgcattatttctgacatgcgggatatctgggcgcttcag
cctcgtctggaacgccggacaggccggaccgcctataaactgatcgagcatgatcggttc
agggcggcctatgattttctgctgctgcgatgtgaagcgggagaaatcgatcctgaaatt
ggcgaatggtggacccgctttatcaatgcggatggtccgacgcgggaagaactgctgaaa
atcaaattcaatagcgcatccgagccggcaaagcgcaagagaaaacgcggcggcaccaga
cgacggcaaaaacccgcatcatccaatacacctggcagcatcgaaccagccgcatag
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