Oxalobacter vibrioformis: NB640_06465
Help
Entry
NB640_06465 CDS
T08675
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
ovb
Oxalobacter vibrioformis
Brite
KEGG Orthology (KO) [BR:
ovb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ovb03032
]
NB640_06465 (gyrB)
03400 DNA repair and recombination proteins [BR:
ovb03400
]
NB640_06465 (gyrB)
Enzymes [BR:
ovb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
NB640_06465 (gyrB)
DNA replication proteins [BR:
ovb03032
]
Prokaryotic type
DNA Topoisomerases
NB640_06465 (gyrB)
DNA repair and recombination proteins [BR:
ovb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NB640_06465 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
Toprim_4
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
WAW08943
UniProt:
A0A9E9LXA3
LinkDB
All DBs
Position
1308516..1311008
Genome browser
AA seq
830 aa
AA seq
DB search
MSENQHTNNQDNNGYGEESIQILEGLEAVRKRPGMYIGDTSDGTGLHHLVFEVLDNSIDE
ALAGYCSEIHVTLHSDNSVSVVDNGRGIPTGIKHDDKNVPKRSAAEIVMTELHAGGKFDQ
NSYKVSGGLHGVGVSCVNGLSTLLQLTIQRDGKKHYMEFARGIPQNTVVETIDGVECSPI
PVIGDAQGTGTQVHFWPDDTIFSAIEFHYDTLARRIRELSFLNNGVRIQLTDERTGRSEV
FAYEGGTRGFVEYINQGKSVLHQNIFQATGERMSDHDTAITVDISMQWNDSYNEQVLCYT
NNIPQRDGGSHLTGLRAAMTRVINRYIEENELAKKAKVDVSGDDMREGLTCVLSVKVPEP
KFSSQTKDKLVSSEVRGPVEEIVAKTLTDYLQERPGDARIICSKIVEAARAREAARKARE
LTRRKGVLDGLGLSAKLADCQEKDPAMAELYIVEGDSAGGSAKQGRDRKFQAILPLRGKV
LNVEKSRFEKMLSSEQITTLIATLGTSIGPEDFDIEKLRYHRIIIMTDADVDGAHIRTLL
LTLFYRQMPQLVERGHIYIAQPPLYKVKVGRDERYLKDDLEEATHMMSIALQGASLIARA
GAEPINGESLEEMVKQYNLANGVITRMSRVIDTDALSAVMTGTTLNLDSREAAEHSARQL
TDAINNPDIQVQAKQDDLSGEYTLCIQRKQHGNIRLTRIDSDFLRSPDYRTLTKASQTFS
GLIGAGATIRRGDGDRMREAAIQNFHQAMQWLRNEAERGVSKQRYKGLGEMNPDQLWETT
MDPGVRRLLKVRIEDAIAADQIFTTLMGDNVEPRRAFIENHALMAGNIDI
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaaaccaacacaccaataaccaggataataacggatacggcgaggaatccatc
cagattcttgaaggccttgaggccgttcgcaagcgtccgggcatgtacatcggcgacact
tccgatggaaccgggcttcaccatctggtatttgaggtactggataattccattgatgag
gcactggccggttattgttcagagatccatgtcaccctgcattcagacaattcggtttcc
gttgtcgacaatggccgcggcattccgaccggcatcaagcacgatgacaagaatgttccc
aaacgcagtgcggctgaaattgtcatgacagagctgcatgcaggcggcaaatttgaccag
aactcctataaagtctctggtggccttcatggcgtgggcgtttcctgcgtcaatggcctc
tccacgctcctgcagttgacaatccagcgcgatggcaaaaaacattacatggaatttgcg
cgtggcattccgcaaaatacagtggttgaaacgattgacggggtggaatgctcacccatt
ccggttattggtgacgctcagggaaccggcacccaggtgcacttctggcccgatgacacc
attttttccgccattgagtttcactacgacaccctggcacgccgcatccgcgaactgtca
tttctgaataatggtgtccgcatccagttgaccgacgaacggaccggccgctccgaggtg
tttgcctacgaaggcggaacccgcggctttgttgaatacattaaccagggcaaaagcgtc
ctgcaccagaatatcttccaggcgaccggcgaacggatgtctgaccatgataccgctatt
accgtcgatatttccatgcagtggaatgacagttataacgagcaggttctttgctatacc
aacaatattccccagcgtgacggcggcagccatctgaccggcctgcgcgccgccatgacc
cgggtgatcaaccgttacattgaggaaaacgaactggcaaaaaaagccaaggtcgacgta
tccggcgatgacatgagagaaggactcacctgtgttctctcggtcaaggtacccgaaccc
aaattcagctcacaaaccaaggacaagctggtttcatccgaagttcgcgggccggtagag
gaaatcgttgccaagaccctgaccgactacctccaggaaagaccgggtgatgccagaatc
atctgcagcaaaattgtcgaggcagcccgcgcacgtgaagccgcaagaaaggcaagggaa
ctcacccggcgtaaaggcgtgctggatggtcttggtctgtctgccaagctggctgactgc
caggaaaaagaccccgcaatggctgaactttatatcgttgagggcgattcggcaggcggc
tcggcaaaacagggacgtgaccggaaattccaggccattttgccgctgcgcggcaaggta
ctgaatgtggaaaaatcccgttttgagaaaatgctttcctctgaacagatcaccacgctg
attgccacacttggcaccagcatcggaccggaagatttcgacattgaaaaactgcgttat
caccgcatcatcatcatgaccgacgccgatgtggacggtgcgcatatccgcaccctgctt
ttaacgctcttttaccggcagatgccgcaactcgttgagcgaggacatatttatattgca
cagccccccctgtacaaggtcaaggttggccgggatgaacgttatctcaaggacgacctg
gaagaagccacgcatatgatgtcgatcgcattgcagggcgcctcactgattgctcgcgcc
ggcgccgagccgatcaacggagaatcactggaagagatggtcaagcagtacaacctggcc
aatggcgtcattacgcgcatgtcccgggtcattgataccgatgccttatctgcggtcatg
accggcaccacgctgaacctggactccagagaagcggcagaacactctgcccgccagttg
accgacgccatcaataatcctgatatccaggtccaggccaaacaggatgacctttccggt
gaatacacactatgtatccagcgcaagcagcatggcaatatccgcctgacaagaattgat
agcgacttccttcgcagcccggactaccgcacgctgacaaaagcctcacagacatttagc
gggttgatcggcgctggcgccaccatccggcgtggcgacggcgaccgcatgcgcgaagcc
gccatccagaacttccaccaggccatgcaatggctgagaaatgaagcggagcgcggtgtt
tccaagcagcgatacaaggggctgggtgagatgaacccggatcagttatgggaaaccacc
atggatccgggagtccgccgtctgctgaaagtcaggattgaggatgcgattgccgctgac
cagattttcacgaccctcatgggtgacaatgtcgaaccccgccgcgcctttattgaaaat
catgccttaatggcaggcaatatcgatatctga
DBGET
integrated database retrieval system
