Oxalobacter vibrioformis: NB640_07525
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Entry
NB640_07525 CDS
T08675
Symbol
rapZ
Name
(GenBank) RNase adapter RapZ
KO
K06958
RNase adapter protein RapZ
Organism
ovb
Oxalobacter vibrioformis
Brite
KEGG Orthology (KO) [BR:
ovb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ovb03019
]
NB640_07525 (rapZ)
Messenger RNA biogenesis [BR:
ovb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
NB640_07525 (rapZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PapZ_C
RapZ-like_N
AAA_18
AAA_22
SLFN-g3_helicase
Sacchrp_dh_NADP
FtsK_SpoIIIE
AAA_29
Motif
Other DBs
NCBI-ProteinID:
WAW09133
UniProt:
A0A9E9P2L4
LinkDB
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Position
complement(1516638..1517504)
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AA seq
288 aa
AA seq
DB search
MHIILITGISGSGKSVALNVLEDAGYFCVDNLPPVLLPNLVETCIEEKKSRLAVAVDSRS
AHSLSDLPATVEKLRSDGHHLQVVFLTADTHSLINRFSETRRSHPLAHRAPSSHDPSDQR
TLMEAIHAEREMLAEIQSIAHVVDTSHLSTNKLRGWIKEFVEAEHSTDLTLHLESFGFKF
GIPQDADLMFDVRSLPNPHYDLRLRPLTGKDEPVRQFLEAQPEVGDLLTDIRQFVEKWLP
SYKRDHRSYLTVALGCTGGQHRSVYMIEELARYFSQSETVLVRHRNLS
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgcatatcatcctcattaccggtatctcaggttccggcaaatccgttgcattgaatgtg
ctggaagatgccggttatttctgcgttgataacctgccccccgttttactgcccaacctg
gtcgaaacctgcattgaagaaaaaaaatcgcgcctggctgttgcggtcgattcgcgaagt
gcgcactcactttccgatcttcctgccaccgtggaaaaacttcgcagtgacggacaccat
cttcaggtggttttcctcacggcagatacccactccctcatcaaccgtttttccgaaacc
cggcgaagccatcccctcgcccatcgcgcgccatccagccatgacccctcagaccagcgc
accctcatggaagccatccatgctgaaagagaaatgctggcagagatccagtcaatcgct
cacgtcgtcgacacatcccatctctcaacgaacaagctccggggctggatcaaggaattt
gtcgaagcggagcacagtacagacctgacactgcatctggaatctttcggcttcaagttt
ggtattccgcaggatgccgacctgatgtttgacgtgcgcagcctgcccaatccgcattac
gatctgcgcctgcgcccgctcaccggaaaagatgagccggtcagacagtttctggaagca
caacccgaagtcggtgacctcctgacggatatccgtcagtttgttgaaaaatggctgcca
tcttacaaacgggatcaccgcagttacctgaccgttgccctcggatgcacagggggtcag
catcgttcagtctatatgattgaagagcttgccagatacttcagccaatcggaaaccgtt
ctggtccggcaccgcaatctttcctga
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