Oxalobacter vibrioformis: NB640_07980
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Entry
NB640_07980 CDS
T08675
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ovb
Oxalobacter vibrioformis
Pathway
ovb03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ovb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NB640_07980 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ovb03021
]
NB640_07980 (rpoA)
03400 DNA repair and recombination proteins [BR:
ovb03400
]
NB640_07980 (rpoA)
Enzymes [BR:
ovb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NB640_07980 (rpoA)
Transcription machinery [BR:
ovb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NB640_07980 (rpoA)
DNA repair and recombination proteins [BR:
ovb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NB640_07980 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
WAW09213
UniProt:
A0A9E9LXV0
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All DBs
Position
1600537..1601514
Genome browser
AA seq
325 aa
AA seq
DB search
MPNNFLKPRIINVEVLGPGHSRVEMEPFERGYGHTLGNALRRILLSSMAGYAPTEVAIAG
VVHEYSTLDGIQEDVVDLLLNLKGVVFKLHNRDAVTLNLKKDGAGIVTAADIELTHDVEI
INPEHVIAHLTESGKLDMQIKIEAGRGYVPGNVRRLSEDANKTIGRIILDASFSPVRRVS
YSVESARVEQRTDLDKLIINIETNGVITAEEAIRQSARILVDQLTIFAALEGTETSAEAM
SQLPPVDPVLLRPVDDLELTVRSANCLKAENINYIGDLIQRSENELLKTPNLGRKSLNEI
KEVLASRGLTLGMKLDNWPPPGLEK
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgccaaataattttctcaagccgcgcatcatcaatgtggaagtgctgggtcccggtcat
tcccgcgtcgagatggagccctttgagcgtggttatggacacacactgggcaatgctctg
cgccgcattctgctttcctccatggctggctatgcgccaactgaagttgccattgccggt
gtggtacatgaatattcgacacttgacggtatccaggaagacgtcgttgacctgctgtta
aatctcaagggggttgtattcaagctgcacaaccgcgatgcggttaccctgaacctgaaa
aaggatggggcaggtatcgtgacggcagctgatattgaactcacgcatgatgttgaaatc
atcaatccggagcatgtgattgcccatctgacagaaagcggcaagctggacatgcagatc
aagattgaagcgggtcgcggctatgtgccgggcaatgtgcgtcgtctttcggaagatgcc
aacaagacaatcggccggattattctggatgcgtctttctcaccggtgcgtcgcgtttcc
tattctgtggaatccgcccgtgttgagcagcgtaccgatctggacaagctgatcatcaac
attgaaacgaatggtgtcatcaccgctgaagaagcgattcgtcagtcagcccgtatcctc
gttgaccagttgaccatttttgccgcacttgaaggcacagagacttctgctgaagccatg
tcgcagctgccgccggttgatccagttctgctgcgtccggttgatgatcttgagctgact
gtccgttcagccaactgcctcaaggcggaaaacatcaattacattggggatttgatccag
cgcagtgaaaacgagttgttaaagaccccgaatctgggtcgcaaatccttgaacgagatc
aaggaagtgctggcttcccgtggtttgaccctgggcatgaagctggacaactggccgcca
ccggggcttgaaaaataa
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