Oxalobacter vibrioformis: NB640_08025
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Entry
NB640_08025 CDS
T08675
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
ovb
Oxalobacter vibrioformis
Pathway
ovb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ovb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
NB640_08025 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ovb03400
]
NB640_08025 (xseA)
Enzymes [BR:
ovb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
NB640_08025 (xseA)
DNA repair and recombination proteins [BR:
ovb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
NB640_08025 (xseA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
DHQ_synthase
Motif
Other DBs
NCBI-ProteinID:
WAW09220
UniProt:
A0A9E9LX47
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All DBs
Position
complement(1610788..1612149)
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AA seq
453 aa
AA seq
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MNPDITEQHTAAAPPVLTVSALNQSVARLLEKSFALTWIAGEISNFTRAASGHWYFTLKD
DTAQVRAVMFRGRAQSVGFDIRNGDRIEARATVTLYPARGDYQLNVEAIRHAGVGNLFEA
FQRLKEKLAKEGLFETDKKQPLPVFPRTIGIVTSLQAAALRDVLTTLSRRAPHVRIILYP
APVQGDGAGEKIAQAIQTASTRAETDMLIVCRGGGSMEDLWSFNEEIVARAIAACTIPVI
SGVGHETDTTIADFVADLRAPTPTGAAEMATRPQTDWMNTIRTQAEDLQYAMERIMANTR
QHVDMASRRLISPATYTRREKIRLGALADQLSNAKKRLVTDAQNRLLHLSIRLRGKLPDT
AVYHTRLQTTRRQMASLISAAMTSHRQGVASWHAQLELLSPERTLERGYAIITDKRGRVI
RSPLKLPIRENVTIRLAQGSAQVGIASVQPEIE
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgaatcctgacatcacagaacaacatacggcagcagcacctcctgtcctgacggtctcg
gcactgaaccagtctgttgcccgcctgctggaaaaaagttttgccctgacatggatcgca
ggtgaaatctcgaactttacacgggcagcttccggccactggtacttcacactcaaggat
gatacggcccaggttcgggctgtcatgttccgggggcgcgcccaatcagtcggttttgac
atcaggaatggcgacaggattgaagcacgcgccaccgtaaccctttacccggcacgtggc
gactaccagttgaatgtcgaagcaatccgtcatgccggcgttggcaacctttttgaagct
ttccagcgcctcaaggaaaaactggcaaaagaaggactctttgaaacagacaaaaagcag
cccctgcccgtttttccccggaccatcggcattgtgaccagcctgcaggctgcagcactg
cgcgatgtgctgacaaccctttccagacgagcaccacatgttcgtattattctgtacccg
gctcccgtccagggagacggcgcaggagaaaaaatcgcccaggcaatccagacggcatcc
acacgtgcagaaaccgacatgctcatcgtctgccggggaggcggcagcatggaagacctg
tggagcttcaatgaggaaatcgtcgctcgtgccattgccgcatgcacgattccggttatt
tccggtgttggtcacgaaaccgataccaccatcgccgactttgttgccgatcttcgcgcc
ccgacaccaaccggtgcggcagaaatggccacccgcccccaaactgactggatgaacacc
atcagaacacaggcggaagatctccagtatgcgatggaacgcatcatggccaatacccgc
cagcatgtagatatggcttcgcgtcgcctgatcagcccggcaacctacacccggcgggaa
aaaatccgtcttggcgcactggcagaccaattgtcaaacgccaaaaagcggctcgtcacc
gatgcacaaaaccggctgctgcacctctcaatccgcctgagaggaaaactgccggacact
gccgtataccatacccggctccagacaacccggcgccagatggcatcccttatcagtgcc
gccatgaccagtcatcggcaaggcgtggcttcatggcatgcacaactggaactcctgagt
cccgagcggacacttgagcgcggctatgccattatcaccgataagcgcgggcgcgtgatc
cgttccccgctcaaattaccgatacgggaaaatgtcactatccggctggctcagggcagc
gcacaggttggcattgccagtgtccagcccgaaatcgaataa
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