Oxalobacter vibrioformis: NB640_08475
Help
Entry
NB640_08475 CDS
T08675
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ovb
Oxalobacter vibrioformis
Pathway
ovb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ovb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NB640_08475 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ovb03019
]
NB640_08475 (recQ)
03400 DNA repair and recombination proteins [BR:
ovb03400
]
NB640_08475 (recQ)
Enzymes [BR:
ovb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NB640_08475 (recQ)
Messenger RNA biogenesis [BR:
ovb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NB640_08475 (recQ)
DNA repair and recombination proteins [BR:
ovb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NB640_08475 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
HHH
HHH_5
GARS_N
ResIII
Motif
Other DBs
NCBI-ProteinID:
WAW09296
UniProt:
A0A9E9LVZ6
LinkDB
All DBs
Position
1698973..1700796
Genome browser
AA seq
607 aa
AA seq
DB search
MPENQHQVNREALTLLQTVFGYPAFRDQQAAIISHVASGQDALILMPTGGGKSLCYQIPA
LIREGVGIVISPLIALMQDQVDALAAIGVKAAFLNSSQTRAESAAVERAALNQEIDLVYI
APERLLTEHCMGWLRQLKIALFAIDEAHCVSQWGHDFRPEYVRLSVLSDVFPDVPRVALT
ATADNLTRADILHHLKLESGRQFVSSFDRPNIHYRIVEKDNPRQQLLDFIHTEHKNDAGI
VYCLSRKRVEETADFLNRNGVSALPYHAGMSNADRTKNQARFLREEGIVMVATIAFGMGI
DKPDVRFVAHLDLPKNIEGYYQETGRAGRDGLPSNAWMTYGLQDVVQQRRMIDESEADPE
YRRIQSGKLDALLGLCEILTCRRIRLLEYFGESAGPCGNCDVCLSPPVSVNGTVIMQKLL
STIYRVGQRFGAMHVIDVLRGKKTERIEEWGHHTLSTFGIGSEESDAAWRSVLRQAIARG
LVTVDAENFNMLRLTEKARPVLKGEAEIWLRPYEKPQRKKKAASRKTYTEKTLHADDQPL
YERLRWWRVETARQQNVPAYVIFQDATLREIAHARPRSLEELAAIPGMGAKRLATWGDAV
LALIQEE
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgccggaaaatcagcatcaggtaaaccgcgaggcgttaacgctccttcagacggttttt
ggttatcccgcttttcgtgaccagcaggcggccattatttcacatgtcgcatccgggcag
gatgcgcttatcctgatgccgacaggcggcggcaaatcattgtgttaccagatccccgcg
ctgatccgcgagggtgtcggtattgttatttctcccctgatcgccctgatgcaggatcag
gtggatgcactggcggcaatcggggtgaaggccgcttttctgaattcatcacaaactcgc
gccgaatcggcagcagtagaacgcgctgcgctcaaccaggagattgatctggtttacatt
gcccccgagcgattgctgaccgagcactgtatggggtggctcaggcaactgaagatagcc
ctttttgccattgatgaagcgcactgcgtttcacagtgggggcatgatttccgaccggaa
tatgtacgcctgtctgttctgtcggacgtgtttccggatgtgcccagggtggcgctcacc
gccacagcggacaatcttacccgtgccgatatcctgcatcacctgaagctggagtcaggc
aggcaattcgtctcttcctttgaccggccgaatattcattaccggattgttgaaaaggat
aatccccggcagcagctgctggattttatccataccgagcataaaaacgatgccgggatt
gtgtactgcctttcacggaaaagggtggaagagacagcggacttcctgaaccgtaacggt
gtttctgcactgccataccatgccggcatgagtaatgcagacaggacgaaaaaccaggcg
cggtttttacgtgaggaaggtatcgtgatggtggcgacaattgcctttggcatggggatt
gataagccggatgtgcgttttgtggcgcatctggatttgccgaaaaatatcgaggggtac
tatcaggaaacggggcgtgccggacgagacgggctgccgtccaatgcctggatgacgtat
ggcctgcaggatgtggtgcagcagcgacggatgatcgacgaatcggaggccgatccggag
taccgccggattcagtccggcaagctcgatgccctgttgggattgtgtgaaatcctgacc
tgtcggcggattcgcctcctggaatatttcggagagagtgccgggccttgcgggaattgt
gatgtctgtctctcgccgccggtttccgtgaacggtacggtcatcatgcaaaagctgctg
tcgacgatttatcgcgtaggacagcgttttggtgccatgcatgtcattgacgtgctgcgg
gggaaaaaaacagaacgtattgaagagtgggggcaccatacgctatccacttttggcatt
ggcagtgaggaaagtgacgccgcatggcgctcggtgctgcggcaggcgattgcacgcggg
ctggtgaccgtggatgcggaaaatttcaatatgctgcggctgacagaaaaggcccggccg
gtactgaaaggcgaagccgaaatctggctgaggccctatgagaaaccgcagcgaaagaaa
aaagccgcctcccggaaaacctatacggaaaaaacactgcatgccgatgaccagccactg
tatgaacggctgcgctggtggcgtgtcgaaactgcccggcagcagaatgtgcctgcctat
gtgatttttcaggatgccactttgcgtgaaatagcccatgccaggccgcgttcacttgag
gagttggcggcgattcccggtatgggcgcaaaacggctggcaacatggggagatgcggta
ctggcgctgatacaggaagaataa
DBGET
integrated database retrieval system
