Oxalobacter vibrioformis: NB640_11340
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Entry
NB640_11340 CDS
T08675
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ovb
Oxalobacter vibrioformis
Pathway
ovb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ovb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NB640_11340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ovb03400
]
NB640_11340
Enzymes [BR:
ovb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
NB640_11340
DNA repair and recombination proteins [BR:
ovb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NB640_11340
Prokaryotic type
NB640_11340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF2378
Motif
Other DBs
NCBI-ProteinID:
WAW09802
UniProt:
A0A9E9LYG9
LinkDB
All DBs
Position
2295538..2296317
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AA seq
259 aa
AA seq
DB search
MTLPAFITDSCARAHPSWHPVLEKGIRAVAQADSSYLAGLEKDTFLPTKNRLFAAFSQPM
DAVRYVLVGEGPYPREESASGYCFMDGAVRDIWSDKGFSKPVNRATSLRNFLKMLLVAEN
TLQPGNTSGEAMAAVARAVSSPDSPYIRQLDELQQAMLDQGFLLLNATLVFRKHIAPARE
SRAWLPFLQTVMDALADNAAASEKPLPVLVLWGKIAEKLTEIESVSRFPQVASEHPYNLS
FIRNTDMQHLFGSMGLFRK
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgaccttgcccgcttttattaccgattcttgtgcacgggcccatcccagttggcatcct
gtccttgaaaagggcatccgtgcggtggcacaggctgacagcagttatctggccgggctg
gagaaagacacctttcttcccacgaaaaaccgtctctttgcagccttttcacagccaatg
gatgccgtgcgctatgtgctcgttggagaggggccttatccccgggaagagagtgcctcc
ggctattgtttcatggatggtgccgtgcgtgatatctggtcagacaagggcttttcaaag
ccggtcaaccgggccacctcgctgcgcaatttcctgaagatgctgctggtggcagaaaac
accctgcagccgggcaataccagcggggaagccatggcggcagtggcccgtgccgtttca
tcaccggactcaccttatatccgccagctcgatgagttgcagcaggcgatgctggaccaa
gggtttctgcttttgaatgccacgctggttttcaggaagcatatcgctccggccagagaa
tcaagggcatggctcccttttttgcagacggtcatggatgcgctggcagataatgcggct
gcgtctgaaaagcctttgcctgtgcttgtcctgtggggaaaaatcgcggaaaagctcaca
gagatcgaatccgtttcccgctttccccaggtggcttccgagcatccctacaatctgtcc
ttcattcgcaacacagacatgcaacatctttttggttcgatgggtttgttccggaaataa
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