Oxalobacter vibrioformis: NB640_12020
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Entry
NB640_12020 CDS
T08675
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
ovb
Oxalobacter vibrioformis
Pathway
ovb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ovb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NB640_12020 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ovb03400
]
NB640_12020 (recD)
Enzymes [BR:
ovb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
NB640_12020 (recD)
DNA repair and recombination proteins [BR:
ovb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NB640_12020 (recD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
AAA_11
NAT10_TcmA_helicase
UvrD-helicase
SH3_13
Viral_helicase1
RecD_N
AAA_22
Terminase_6N
DEAD
T2SSE
AAA_16
SLFN-g3_helicase
AAA_28
nSTAND3
FtsK_SpoIIIE
AAA_25
CbiA
PhoH
AAA_5
Flavi_DEAD
AAA_29
SRP54
ResIII
TrwB_AAD_bind
MukB
AAA_7
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
WAW09930
UniProt:
A0A9E9P377
LinkDB
All DBs
Position
complement(2422336..2424159)
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AA seq
607 aa
AA seq
DB search
MAFHRTPAELLADAFSAYVTTWAKERDVDETAQDWLCGLAYWLSMAVSTGHVCLPLEEQP
DFDRWPPIADVRALLFESGLVGTPDAPGNLPLILDAGNRLYLHRYFAYERTLARRIQALK
TVMPVDTAAARLALDRFFGKAEAKTADWQRLAAALAMRGCLTIISGGPGTGKTTTVANIL
ACLLSQQPAQRIMLAAPTGKAAMRMLEAIRAQTARFPADVQAKMPSEAFTLHRLLGMTST
AGVFRHHADNPLLVDTLVVDEASMIDLAMASHLFNALPAHARLIMLGDKDQLSAVEAGAV
FSELSADPALTPACRADLADMTGIPAEAVTPPQALSDTGLADSTVWLNRNFRFTADSGIS
QLALAIRDGRITEAETALENAPDGSVTWLSRDTAAALPKGVITFLHENHAAYLDAVAQSP
DDPQAVFAAFERFRVLCATREGAYGVSAVNTLMATYARGRLDIPPRQTWYTGRPVMIMEN
DYVLRLFNGDIGIVLPGENGTPMVFFPSDGGDFRAISPARLPAHETAFAMTVHKSQGSEF
DALLILIPPYPTPLITRELLYTAVTRARRHVSLVCSEAVLENGILTSVKKHSGLVARLAE
EAKKAPL
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atggcttttcaccggacccccgccgagctgctggctgacgccttttcagcttatgtgacc
acctgggcaaaagagcgggatgtggacgagaccgcacaggactggctgtgtgggctggcg
tactggctgagcatggctgtctctaccgggcatgtgtgcctgccgctggaagaacagccg
gactttgaccgctggccgccgattgccgatgtccgcgccctgctttttgagtccggccta
gtcggcacgcctgacgcgcccggcaacctgccgctgatactggacgcgggcaaccggctt
tacctgcaccgctactttgcttacgagcgcacgctggcaaggcggatacaggccctcaaa
accgtgatgcctgttgatacggcagccgcccgtttggcactggatcgttttttcggcaag
gcggaggcgaaaacagcagactggcagcggcttgctgccgcgctggccatgcgcggctgt
ctcaccatcatcagcggcgggccgggcacgggcaagaccacaacagtcgccaatatcctc
gcctgcctgctctcgcagcagccggcgcagcgcatcatgctggcagcccccaccggcaag
gccgccatgcgcatgctggaagccatccgggcacagaccgcgcgctttcctgccgatgtg
caggcaaagatgccgtcagaagcctttacactgcaccggctgctgggcatgacatcaacg
gctggagtctttcgccatcatgcggacaacccgctgctggtggataccctcgtggtcgac
gaagcgtcgatgattgatctggccatggcgtcgcacctctttaacgcgctgcccgcccat
gcgcggctcatcatgctgggcgacaaggaccagctctccgcagtggaggctggcgcggtc
ttttccgagctctctgccgatccggcgctgacacctgcctgccgggcagacctggcggac
atgacgggtatcccggcagaagcggtcaccccgccgcaggcgctttctgacacgggcctg
gctgacagcacggtatggctgaaccgcaatttccgttttactgccgactccggcatcagc
caactggcgctggctatccgtgacgggcggataacggaagccgaaaccgcactggagaat
gcgccggatggctcggtgacctggctctcgcgtgatacggctgccgccctgcccaaaggc
gttatcactttcctgcatgaaaaccatgcggcgtatctggatgctgtggcacaaagcccc
gatgacccgcaggcagtctttgctgcctttgagcgcttccgggtactgtgtgccacgcgt
gaaggggcttacggcgtatcggcagtcaatacgctcatggcaacatatgccagaggccgc
ctggatataccgcccaggcaaacgtggtacaccggacgccctgtcatgatcatggaaaac
gattatgtcctgcggcttttcaatggcgatatcggtattgtgcttcccggagaaaacggc
acgccgatggtgtttttcccgtctgatggcggcgatttccgggcaatttcacctgcccgc
ctgcccgcgcacgaaaccgcctttgccatgacggtgcacaaatcccagggatcggaattt
gacgcgctgctgatcctgataccgccttaccccaccccgctcatcacgcgtgaactgctg
tatacggcggtaacgcgcgcccgccgccatgtgtcactggtatgcagcgaagccgtgctg
gaaaacggcatcctcacctcggtgaaaaaacactcggggctggtggcaagattagccgaa
gaagcaaaaaaagcccccttgtga
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