Opisthorchis viverrini (Southeast Asian liver fluke): T265_00138
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Entry
T265_00138 CDS
T04902
Name
(RefSeq) hypothetical protein
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
ovi
Opisthorchis viverrini (Southeast Asian liver fluke)
Pathway
ovi03022
Basal transcription factors
ovi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ovi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
T265_00138
09124 Replication and repair
03420 Nucleotide excision repair
T265_00138
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ovi03021
]
T265_00138
03036 Chromosome and associated proteins [BR:
ovi03036
]
T265_00138
03400 DNA repair and recombination proteins [BR:
ovi03400
]
T265_00138
Enzymes [BR:
ovi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
T265_00138
Transcription machinery [BR:
ovi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
T265_00138
Chromosome and associated proteins [BR:
ovi03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
T265_00138
DNA repair and recombination proteins [BR:
ovi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
T265_00138
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HBB
Helicase_C_2
DEAD_2
ResIII
Motif
Other DBs
NCBI-GeneID:
20314326
NCBI-ProteinID:
XP_009162059
UniProt:
A0A075A7E3
LinkDB
All DBs
Position
Unknown
AA seq
846 aa
AA seq
DB search
MSSEASHQWDYEETRSSSSDSTLLVPSCHATQRKYENWDDARSPKPRQGKSRDRLVSNRG
PSDEVNIDGILVYFPYEYIYPEQYHYMLELKRTLDAKGHGVLEMPSGTGKTVSLLSLIVA
YMKARPGAIEKFIYCSRTVPEIEKVVEELKVLHKYYATETNEDGCGLLAIALSSRKNLCI
ERDVRRAGDGAAVDAACFRLTASFVRKKHASDASTPSCKFYEEFDLHGREQPLPCGIYNL
IMHANIIVYSYFYLLDPKIANLVSRDLPKNSVIVFDEAHNIDNVCIESMSCVLTRRSLEK
ATTSLNRLTDRVKDVKQHNAERLKEEYQRLVEGLRQAQVAKETDQVLANPILPDEILREA
VPGSLRSADSFLAFLRRFLEYVKLRLRIAHVVHETPVAFLRDCLEKVCVDRRPLQFCAER
LRSLLNTLELADYAEFSSLTLLCNFATLVATYTRGFCLIIEPFDERSPTVINPVLYFYCM
DASLPIRPIFSRFASVIITSGTLSPLDMYPRILDFHPVNSASFTMTLARSCVLPMIVSKG
NDQVPMTTKFESREDMAVVRNYGHLLAQLASVVPDGIVAFFPSYHYLESTFATWYEQHLI
EQIQRHKLLFVETQDAEETSLALAAYHRACENGRGAVLLSVARGRVSEGIDFDHHLGRCV
IMFGVPYVYTQSRIFKARLDFLREQYNIQPNEFITFDAMRHAAQCLGRAIRGKSDYGIMI
LADKRYARADKRSKLPGWIQSQLQDAFVNLSTEEAVQASRRFLRLMGQPFNKEDQLGLAL
LTREHVAKLVAQNQAASIRPGNPLNPGEPPASLTTASGHPLNSQQNPYGPQTSAVPRVIS
TTTTFI
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcggaagcctcccaccagtgggactatgaagaaacgcgttcgtcgtccagcgat
agcactcttttggtgcccagctgccatgccacccagaggaagtacgagaactgggatgat
gccaggtcgccaaagcctagacaagggaagtcgagagacaggttggtttcgaaccgcggg
ccttctgatgaagtaaatatcgacgggattcttgtctattttccatacgaatatatctac
cctgaacagtaccattatatgctagagttaaagcgaactttggacgcaaaaggtcatggg
gttttggaaatgccatctggcacggggaaaacagtatcgttactttccctgatcgtggct
tatatgaaggcccgccccggagcgattgaaaaatttatttactgttctagaacagttcca
gaaatagagaaggttgttgaggagctcaaagttcttcacaagtattatgccacagagaca
aacgaagacggctgtggcctgctggcgattgcactcagttcacggaaaaacctgtgcatt
gaacgcgatgtacgccgtgcgggtgacggggccgctgttgatgccgcttgtttccgactg
actgccagttttgttcgtaagaaacatgcgagcgacgcatcaacaccttcatgcaaattt
tacgaggaattcgatttgcatggtcgggagcagcctcttccctgtggaatttacaacctg
atcatgcatgccaatataatcgtttacagttatttttacctcctggatcccaaaatcgcg
aatctggtttctcgtgatcttcccaaaaattcagtcatcgtgtttgatgaggcccacaat
atcgataatgtgtgtatagaatccatgagttgtgtgctaactcggcggtccttggaaaaa
gccacgactagcttgaaccgactgacagatcgcgtaaaagatgtgaaacaacacaacgcc
gaacgactgaaggaggaatatcaaagactcgtcgaaggtctccggcaagcccaagtggcc
aaggaaacggaccaagtacttgcgaatcccatactaccagatgagatcctgcgtgaggcg
gtccccggttctttacgcagtgccgacagttttttggcttttcttcggcgctttttggag
tacgtcaaacttcgtttacgcatagctcatgtggttcacgaaacgccggtcgccttcctt
cgagactgcttggagaaagtgtgcgtggatcgacggccccttcagttttgcgctgaacgg
ctacggtcactattgaacacacttgaactggctgattacgcggagttttccagtctcact
ttgttgtgtaatttcgccacactagttgccacgtacactcgcggtttctgcctcatcatc
gaaccttttgacgagcgttcgcccacggtgatcaatccagttttatatttctattgcatg
gatgccagtttgccaattcgacccatcttcagtcggtttgccagcgtgataatcacgtcg
ggaaccctctccccacttgacatgtatccacgtattttggactttcatccggtgaactct
gcctcgttcacaatgactttggcccgcagctgtgtgcttcccatgattgtatcaaaagga
aatgaccaggttccaatgacgacgaaattcgagagtagggaggacatggctgttgtgcgg
aactatggacatctgttagcccagctagcttcagtcgtacccgatgggatcgtggctttt
ttcccgagctatcactatctggaatccacttttgcaacgtggtacgaacagcatttgatt
gaacaaatccaacgccacaagctactgttcgtggagacgcaggatgcagaagaaactagc
ctcgcgttggctgcctaccatcgagcatgcgaaaatggccgtggagcagtcctgttgtcc
gttgctcgtggtcgtgtttctgaaggaatcgattttgatcatcaccttgggcgctgtgtc
attatgtttggtgtcccttacgtgtacacacagagtagaatattcaaggcccgattggat
ttcctccgagaacagtacaacattcagcccaatgaattcatcactttcgatgcaatgcgg
catgcagcacaatgcttgggtcgtgccattcgcggcaaatctgactacggaatcatgata
ttggctgataagcgatatgcccgagctgacaagcgttcaaaattgcccggatggatccag
tctcagttgcaagatgcgtttgtgaatctatccactgaagaagccgttcaggcttctcga
cgttttctacgtttgatgggccagccttttaacaaggaggaccagttgggtttagctcta
ttaacacgtgaacatgttgcaaagctagtggcccaaaaccaagcagcgtcaattcggcct
ggaaaccctctaaatcctggtgaaccacccgctagtctgacaaccgcaagtgggcatcct
ttgaacagtcaacaaaacccatacggtccacagacatcggctgtccctcgggtcatatct
actacaaccaccttcatctga
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