Opisthorchis viverrini (Southeast Asian liver fluke): T265_00289
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Entry
T265_00289 CDS
T04902
Name
(RefSeq) hypothetical protein
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
ovi
Opisthorchis viverrini (Southeast Asian liver fluke)
Brite
KEGG Orthology (KO) [BR:
ovi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ovi03019
]
T265_00289
03041 Spliceosome [BR:
ovi03041
]
T265_00289
03036 Chromosome and associated proteins [BR:
ovi03036
]
T265_00289
Enzymes [BR:
ovi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
T265_00289
Messenger RNA biogenesis [BR:
ovi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
T265_00289
mRNA cycle factors
Common to processing body (P body) and stress granule
T265_00289
Spliceosome [BR:
ovi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
T265_00289
Chromosome and associated proteins [BR:
ovi03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
T265_00289
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
20314477
NCBI-ProteinID:
XP_009162298
UniProt:
A0A075ACU7
LinkDB
All DBs
Position
Unknown
AA seq
1093 aa
AA seq
DB search
MRVNISCNANGFLSRSTPTKFSTQDVQKTSPPLSVSRGPPLEWLPASNPWTMKRVSRCLI
SFPWRTVASGGTQFLLTPCLNKAWQTGFLPLTQQTPGWDIGTHIHFFHTENIKSSATPFF
HLCLSGERQPLTDKNKTDPGNVGKILDPVYQSFGYLSIGESTQQLTDGSYFYANNPQVLK
NFATIPNGAPKRTGARLGRFAATDNSVTPLDGFSLVSQWGIANKLDNVGLFGPPPLIPEN
GQPKQGNFNSRPYRKSYNNQSTWLQQPSKKLEQELFGQPKRGLNFQLYDSIPVTQSGPNW
SPVKPITSFKDVELHQTIKENIERAQYIHPTPVQKYALPIIAAKRDLMACAQTGSGKTAA
FLLPILNQLFQEEKTEPAVVNGGACPVALVLAPTRELSCQIFDEARKFAYQSDVRPCVVY
GGASIFLQVRELQHGCDLLVATPGRLVDMISRGNVSLDHVKYLVLDEADRMLDMGFEPQI
RRIVELHRMPPAGQRQTLMFSATFPKEIQTLARDFLHSYIFLAVGRVGSTNENITQEVWN
VADKDKPELLVRLLQQKDPEGLVLVFVETKRGADLLAKFLGQLNFPVTSIHGDRPQAERE
NALSSFRDGLTPILIATAVAARGLDIPNVKHVINFDLPSDIEEYVHRIGRTGRMGQPGSA
TSFFSDRNQNVVRDLVELLRESKQSVPAWLEARLSYSTTGDNRRSKGNNSSKRRANYASL
DYRQHGIRGTSFVSTVSMANNNSIPNGGFGLLGNCSVPLAAVGNGPRYPQNTGYSAAYHP
VSQQQQQQQQQSARFMYRNGPNYLGRGSNFGSHLEQQPPPMPQPLPLFPPQHRPQVTHPT
ALLPTGAPPAAMMHQFLAAAAAAGLTPGHGNVGSANGQPGTGISVSTGGYSGHIAHGAAF
PTATYQAFHPASIFSASNPLPGHPVSSHARDGPATAVVFPPSAGMFPTVNSGTLGGTAPT
FSTTNSADHQALQQPHPAAALIPNSFHLSYYGQQPFGPGSAAPQRQSPHQQQAAVAAAMA
VAAAMSNGAQPTAAGIDPSGAISVQPVHTENPIPVEGTTASSPSAGSVKAGAVVQQAYRG
NGMGEWWPAPTPT
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atgcgagtaaacatttcctgtaatgccaatggcttcctttcaaggagtacgccaaccaag
ttttctactcaggacgtacaaaagacgtcacccccattgagcgtgtccagagggccacca
ctagaatggttgccggcctcaaatccgtggactatgaaacgcgtctcgcgatgcttgatc
tctttcccctggagaaccgtcgcctccggggggacccaattcttacttacgccctgtttg
aacaaagcttggcaaacaggttttttaccgttgacccagcaaacacccggctgggacata
ggcacacacattcacttttttcatactgagaacataaagagcagtgctacaccctttttt
cacttgtgcctttcaggtgaacgacagccactaaccgacaagaacaaaaccgacccggga
aacgtgggcaaaatcctcgaccctgtgtatcaatccttcggttacttgagcattggagaa
agcacacagcagctaaccgatgggtcctacttttacgccaacaaccctcaagtcctgaag
aattttgccactattcctaatggggcaccaaaacgcactggtgcccgtctgggacgtttt
gcagccaccgacaacagcgttactccacttgatgggttttcgctggtcagtcaatgggga
atcgcaaacaaactggataatgtgggcctattcggtcctcctccacttatccctgagaat
gggcagccaaaacaagggaatttcaattcacgaccttataggaagtcttacaacaaccag
tcaacatggcttcaacaaccatccaaaaagctggaacaggagttgtttggacagccgaaa
cggggcttgaactttcaattatatgacagcataccagtcacccaatccggacctaattgg
tctcctgtgaaacctataacttcgttcaaggatgttgagttacatcaaactataaaagaa
aatattgagcgtgctcagtacattcatccaacacctgtgcaaaaatatgctttgccaata
atcgctgcaaaaagagatcttatggcctgtgcgcaaacgggatctgggaagacggctgcc
tttctacttcccatcctcaatcaactttttcaagaagaaaagacggaaccagctgtcgtt
aacggcggagcttgtcctgtggctcttgttttggcaccaaccagagagctttcttgtcag
atattcgacgaagctcggaagttcgcttaccagtctgacgttcgtccttgtgttgtctat
ggtggggcatctatttttctgcaagttcgtgaacttcaacatggctgtgatcttcttgtg
gccacacccggtcgcttggtggacatgataagtcgcggaaacgttagtttggatcatgtc
aagtatctagttttagatgaagccgatcgtatgctagacatgggatttgagccacaaatt
cgtcgcatagtggagttgcatcgcatgcctcctgccggacagcgacaaaccttgatgttc
tccgcaacctttccaaaggagattcagacactcgcccgggatttcctacactcttacata
tttctcgctgttggccgcgtgggtagtacaaatgagaacataactcaggaagtatggaac
gtggccgacaaggataaaccggagcttctggttcgcctgcttcaacaaaaagatcccgaa
ggtctggtgcttgttttcgttgagaccaagcgtggagctgatttacttgccaagtttctg
ggtcagctcaattttcctgttacgtccatccatggcgaccgcccacaagctgaacgggag
aacgccctctcttcgttccgtgatggacttactcctatcttaattgctaccgctgtggct
gcacgaggtctcgacatacccaacgtcaagcatgttatcaacttcgacctgccgtcggat
attgaagaatatgtgcatcgcattggacgtactggtcggatggggcaaccaggttcggca
acctcgtttttttcggatcgcaatcaaaatgtagttcgggatctggttgaattactgcgc
gagtccaaacagtccgttcctgcttggctggaggcacgcctgtcctattcgactactggt
gataatcgtcgatccaaggggaataactcttccaaacggcgggccaactacgcatcgcta
gattaccgacaacatggaatccgtgggactagcttcgtcagcaccgtctcaatggcgaat
aacaatagcattccaaacggtggatttggcttgctgggtaactgttcggtaccactggct
gctgttggcaatggtcccaggtatccacaaaataccggctacagtgctgcatatcatcct
gtcagtcagcaacagcagcagcaacaacaacagtcagctcgattcatgtatcgtaatggt
ccaaactatttgggacgtggatctaattttgggagccacttggagcaacaacctccgccg
atgccgcaaccacttccattatttccaccacaacatagacctcaagtaactcaccccaca
gctcttttaccaaccggagcacctccagcagccatgatgcatcaatttttggcagctgca
gcagcagctggtctcactccaggtcacggaaatgttggttctgcgaatgggcaacctgga
acagggatttctgtctccacgggcgggtacagcggccatattgcgcatggtgccgctttc
cccactgctacataccaggcgtttcatccggcgtccatattttctgcgtcaaacccactc
ccgggtcatccggtttcatcacacgccagagatggtcctgcaactgctgtggttttccct
ccttccgctggaatgtttccgacagtcaattctggtactctgggaggaacggctccgact
ttcagtaccaccaactctgccgatcatcaagctttacagcaaccacatcccgctgcggct
ctaataccgaacagtttccacttatcctattatgggcagcaaccgtttggtcctggatcc
gctgcaccacaacgtcagtcgccccatcagcaacaggctgcagttgcagcggcaatggca
gtcgcagcagccatgtctaacggcgcacaaccgactgccgctggcatagatccttcaggg
gcgatctctgtccagccagttcatacggaaaacccgataccggtggaaggcacgacagct
tccagcccttctgccggttctgtcaaagctggggctgtggttcaacaagcctacagagga
aacggtatgggagaatggtggccagccccaactcccacttag
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integrated database retrieval system
