Opisthorchis viverrini (Southeast Asian liver fluke): T265_00347
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Entry
T265_00347 CDS
T04902
Name
(RefSeq) hypothetical protein
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
ovi
Opisthorchis viverrini (Southeast Asian liver fluke)
Pathway
ovi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ovi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
T265_00347
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ovi03032
]
T265_00347
03400 DNA repair and recombination proteins [BR:
ovi03400
]
T265_00347
DNA replication proteins [BR:
ovi03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
T265_00347
DNA repair and recombination proteins [BR:
ovi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
T265_00347
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
BRCT_2
RTT107_BRCT_5
BRCT_TopB1_SLF1
TopBP1_BRCT0
ECT2_BRCT0
Motif
Other DBs
NCBI-GeneID:
20314535
NCBI-ProteinID:
XP_009162356
UniProt:
A0A075A6C3
LinkDB
All DBs
Position
Unknown
AA seq
1449 aa
AA seq
DB search
MYHCPLTITCIFITAHVEISNYCCSLRSSFILFCCYVQMEGDKFEIVFVNDHATPLLSAA
FDAVSSYENLTTKRLDEVEIMNRYPKQLPKRTSFVFCRFEGECFEHLRSMGAAIYGPQII
LHYVRENKPLPKVSYPLFSTALMGAIATVTSVTGSEREYLLSSIQMLHGQASRDLFDGVN
VVITPKVGSKKYLVGASRGLHILLPSWISEAWRLSSIQDPIDMMLPAYTERYRVPVFSQL
VICVSGLSAEERKEVSDLVLKHGGRYSGVMKVGETTHLIIKQPVGLKYSHAKKWKIQTVS
LRWLVDSVNKGYALDEEDYRVSESCETSSTPVGDANKRSFSFDNISVISHVNNASTRIDE
TRSDCQHAESFIRPKLVPRVPLILSNCVFTLFGCTREESASFSKLVGELGGHLCTELPDQ
VSEAVTHVLVGSATNATALLQTREKDMLYVKGSWLVACKESGQRLSETNYLVPLTEDAED
RTTVVSADEEPKRIVDTEDLQLINQYFGSGGLADMDDFTSGSQNLKPTVSNDKTLPDATN
IDITVANGSTTVSGDGFFSGLSFLLHDELSAKIREELKKSIFSSGGRVVDSPHNVDFLVA
PFFVSSFPKLPKSCVLVTAPWIEHCIAESGLQVDELLKEPAFVPIERTGAPPLKDCVISM
SGFVGRDRSLLTAYAQCLGALVQDCFLRKPVPSRNLAASTHLVSAKPDGRKWPAAQSWGI
PTVSRSWLYACAERWMKVKELDFPVQNPSGDIPTQVSTSNPTNGQSGNLLQTERVLKEIQ
ANTKQMQPSEPHDKPHVSTPVPGHKVSGSDSLLGTLRTPDWVCNSLQTDIGNSSKDSLDN
FPRPSPPLSEQVAKCLKNAVARTAALPKRKLDLSYEEPDAAPLRGVVICVAKHLSSRQVE
LNGITRQLGGDFKWIYDPLVCTHIIAEYETVGQVPPSDNQSSGQQDPYPDVTAARSAGKF
IVNPRWLTSCEASSSRQPERDFPPTESSRPVLETPDEPPRKVIRTASSNLLGDVSRRLEL
VLGVTSKVDQHEEAPLSGVGGSEVRGKRSPTSDDVTHGEIEGAVSFLADTAGSGPRRLRR
NPRRATHLAVVEQGSGTNIPPEVSGPSSPAALPNPTDKAQPGQSLMVRWKYEDAPPRSPE
LSNQSAPSLEQHRAPHSPMPSNPGQGIMGIEPIATRERGMKRPASSISLITEDKLTSVPP
QTATKDVPASREPEPPRRYVISFSGLPNDARDHYAHVVSQLGGEVDSQLTISEHTTHLIV
HTPTRSEKYLICLATGKWILHKSYLDACLRESRWVDECNFEWGGPGTEPLLMQLSPAVPA
VGPNANNSKIHEQRQQANQMRELARAARHWRLAGGKAFKNWRVIFGPGCDKETSFRRVIE
AGAGQVLASGPPYPPASSVTHSFYKSRSSTSVNRNQLPAEYEWLRIDYLLAYLTAGTEVS
REGFALGTP
NT seq
4350 nt
NT seq
+upstream
nt +downstream
nt
atgtatcattgtccactgacgataacctgtattttcattacagcccacgtggaaatcagt
aattactgctgctctttacgtagctcattcatcttgttctgttgttacgttcaaatggaa
ggagacaagtttgaaatcgtatttgtaaatgatcatgcgacgccgctgctatccgctgct
tttgatgctgtctcttcttacgagaacctcacaacaaagcgcctggacgaagtggaaata
atgaaccgttatccaaagcagcttccaaaacgcacctcatttgtgttttgccgattcgaa
ggtgaatgtttcgaacatctgcggtcgatgggagcagcaatctatggaccacagataatc
ctgcactatgttcgtgaaaacaaaccgttaccaaaagtatcatacccactcttctcaaca
gcgcttatgggtgcgatcgccacggtcacttcggtaactgggtctgaacgagaatattta
cttagttcgattcaaatgctgcatggacaggcatcacgtgacctcttcgatggcgtgaac
gtggtcataactccaaaagtaggatccaagaaatacttggttggcgctagtcgtggcttg
catattctgcttccttcgtggatcagcgaagcttggaggctatcttctattcaagatcca
atcgacatgatgcttcctgcatacacggaacgctatcgcgtccccgttttctctcagctc
gtaatttgtgtatctgggttatcagcagaagaacgaaaagaggtatccgacttggtttta
aagcatggtggtcgttactctggcgttatgaaagtcggtgaaacaacacatctgattatc
aaacaaccagttgggttgaaatattcgcacgcaaaaaaatggaaaattcagacagtaagc
ttgcggtggctcgtggattctgttaacaagggttacgcattggatgaagaggactatcgt
gtatctgaatcgtgtgaaacctcatccacacctgttggtgatgctaacaaacgctcattc
tcgttcgacaacatatctgtgatcagtcatgtgaataacgcgtctactcgaattgatgag
acccgcagtgactgtcaacatgcggaaagcttcatacgaccgaaacttgtcccacgtgtg
cctttgatacttagcaactgtgtgttcaccttgttcggctgcactagggaagaaagtgct
tcattttcaaaacttgttggggaattgggtggccacctctgcacagagcttccagatcaa
gtatcagaagccgtaacccatgtccttgttggaagtgctacaaacgcaactgcattactg
caaacaagagaaaaagatatgctttatgtcaaaggttcttggttggtggcctgcaaagag
tctggacaacgtctatcagagacaaattatcttgtccctctgacggaagatgctgaagat
agaacaactgtagtctctgcagacgaagagccaaaacggattgttgacacggaagacttg
cagctgatcaatcaatacttcggatctggtgggcttgcagatatggatgactttacaagt
ggctctcaaaatttaaaaccgaccgtttcgaatgataaaactcttcctgacgcaaccaat
atagatatcactgttgccaacggctccaccactgtcagtggtgatggctttttttctggc
ctatcctttttactacatgatgaactgtctgccaaaatacgagaagagcttaaaaaatca
atattctcttctggtggacgtgttgtggactcaccacataatgtcgattttctggtggca
ccattttttgtgagttcatttccgaagctcccgaaaagctgcgtgctcgtgaccgcacct
tggattgaacattgtatagctgaatcaggtttacaagtggatgagctactaaaagaaccg
gcgtttgtgcccatagaacgtacaggagcacctccgttgaaggactgtgtcatttcaatg
agtggttttgtcgggagagaccgttcgttgctcacagcatatgcccaatgccttggagct
cttgtacaagattgctttcttcgcaaaccagtaccttcacggaacctggcggccagtacc
catttggtctctgccaaaccggacggacgaaaatggcctgctgcccagtcgtggggtata
ccaactgtgagtcgttcttggttatatgcttgcgcagaacggtggatgaaggtcaaagag
cttgatttccccgtccagaacccgagtggggacattccgactcaagtttcaacttccaac
ccaaccaacggtcaatcaggtaacttgctgcaaacagaaagagtcctgaaagaaatccaa
gcaaacacaaaacaaatgcaacctagtgagccacatgacaaaccacacgtatctacccca
gttccaggccacaaagtttctggatctgactcattactcggtacactccgcactcctgac
tgggtttgtaacagtctacagacagacataggtaatagctctaaagattctcttgacaac
ttcccgcgaccttctccaccactatcagaacaagtggcaaagtgtctgaagaatgccgtt
gcgagaactgcagcacttccgaaacgcaagctcgacctctcttatgaagaacctgatgcc
gcacccctgagaggggttgtcatttgtgtggcaaagcatttgagttcacgacaagttgaa
ctgaacggcattaccaggcaacttggtggggactttaaatggatttatgacccactagtg
tgtacgcacatcattgccgaatatgagactgttggccaagttcctccttcggataatcaa
tccagtgggcaacaagacccttatccagatgtaacggctgctcgaagtgccggaaaattc
attgtgaaccccaggtggctaacctcttgtgaagcaagttcctctcgtcagccggaaaga
gattttcctccaaccgaaagctcacgccccgtgctcgaaacccccgatgagcctccacgc
aaagtaatcagaactgcgtcttcgaatcttctgggtgacgtcagtcgtcgtttggagttg
gtcttgggagtgacgtcaaaagtggatcaacatgaggaagctccactctctggcgtgggt
ggctcggaggtgagggggaagcgaagtccgacatctgacgatgtcacccacggcgaaatt
gaaggtgccgtgtcctttttagcagacactgctggttctggaccacggaggcttaggcga
aatcctcgtcgcgcaacacatcttgctgttgtggaacagggctctggaactaatatcccc
ccagaggtgtctggtccttcttccccggcagcactacctaatcctacggacaaagcgcaa
cccggtcaatctttaatggttcgatggaaatatgaggatgctcctcctcgatcaccagaa
ctcagcaaccagtctgcgccatcattggaacagcatcgcgcacctcattccccgatgcct
tccaatccggggcagggtatcatgggaattgagccgatcgcaactcgtgagcgtggcatg
aaaagacccgcctcatcaatcagtttgataaccgaggataaactgacttccgtaccacca
caaaccgcgaccaaagatgtcccagcgtcacgcgagccagaaccgccgcggcgctatgtc
atttcgttcagtggcctgcccaacgatgcacgtgatcactatgcgcacgtagtcagtcaa
ctaggtggtgaggtggacagccaattgaccattagcgaacacacaacacacctcatagtc
catacaccgactcggagtgaaaagtatttgatctgcctggcaacggggaagtggatcctt
cacaagtcctacttggatgcctgccttcgtgaatctcgatgggtggacgaatgtaatttc
gaatggggtggtccgggtacggaacctttgctgatgcagctcagtccagccgtgccagct
gtcggccccaatgcaaacaattccaaaatacatgaacaacgtcaacaagcaaatcagatg
cgcgagctggcacgagccgccaggcattggcgtctggctggcgggaaggcatttaaaaac
tggcgtgtcatatttggaccgggatgtgacaaggaaactagttttcgacgggtgatcgaa
gcaggggccgggcaggttcttgcgagtggtcctccataccctccagcttcctctgtcact
cactcattttacaagagtcgatcttcaacttccgtcaaccgcaaccagttaccagcagaa
tacgagtggctgcgtattgactacctgttggcctatttaactgcgggaacggaagtgtca
cgggaaggattcgctcttggaactccttga
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integrated database retrieval system
