Opisthorchis viverrini (Southeast Asian liver fluke): T265_00786
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Entry
T265_00786 CDS
T04902
Name
(RefSeq) hypothetical protein
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
ovi
Opisthorchis viverrini (Southeast Asian liver fluke)
Pathway
ovi03440
Homologous recombination
ovi03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ovi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
T265_00786
03450 Non-homologous end-joining
T265_00786
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ovi03032
]
T265_00786
03400 DNA repair and recombination proteins [BR:
ovi03400
]
T265_00786
DNA replication proteins [BR:
ovi03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
T265_00786
DNA repair and recombination proteins [BR:
ovi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
T265_00786
BRCA1-C complex
T265_00786
NHEJ (non-homologous end-joining)
MRX complex
T265_00786
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_21
SbcC_Walker_B
Rad50_zn_hook
REST_helical
AAA_29
AAA_13
ABC_tran
AAA_16
Motif
Other DBs
NCBI-GeneID:
20314974
NCBI-ProteinID:
XP_009162922
UniProt:
A0A075A0Q4
LinkDB
All DBs
Position
Unknown
AA seq
1376 aa
AA seq
DB search
MALVERMSILGIRSFGHETPQKIEFFTPVTLILGPNGTGKTTIIECLKYSTTGDLPPGSK
TGCSFIHDPRIARETEVKAKVTLQIKDVRGQPMIVSRALVATQRDKAKQGTLKTLDGSIK
RQLPDGSITSISSKCAEIDQEMVTSLGVSKAVLENVIFCHQEDSNWPLQEAKSVKQRFDD
LFASSRYVKALDAMRKCKQEKDTTIKVYKAELKHLSKSRDEAAKIRCEREELQHSIEKQE
QLLASVTAKLNPIVEQLNLYKQKYAELIQLQAQLKSHEAEKAHLEEAISNLRANIKEEFD
GNNEELSTLVEDSGTELERKQLNLSRLEEAEQTNRVKMRESEAQRNKAMVEIAQLELHVK
NLSETISNRNSLLRSAVEQCGLADVASFLESDSTMTEEHVMSVTSELQRHMDSTMEAELR
LKERMRKFEAEETERVNQAINELARVEHNHEEAQRCLRETRSEITSLKRRVENAKSVISQ
MESVRNELLNAEAHVDQLCTSSELKDTREQLQHLSEVRKATEQSLLTLDEKIAMLQQNSS
QRQQLDVLRKDRDSKFESARKIRSRHLEALEQVFGTNSVPTIISEVDIAVALDRSKGRAQ
QTTTIQDRLRHSFLTRLSSLEQSTREARKRLAKYEQEKSVLETKTKFTRSQLQGKQKQAD
QMAERILSAAGSADLEQCLSRLQQRRKLLEEECANEQGSLYLWCKFRDRLARSDPDCPVC
HRQLSDRSEQDELLTEMNQRIESMPGEFERKKVELAQLVTQHETLLELRPIYSELEHLRK
TDIPALEAQLNTELESLQTARDNSEQETARLEACHADEALARSIQGDLAVFERMENDIIE
LSGKIARLQAESGETMEGTETVDALQEERRTLRDKQISVTSEMTRLQDHVQQLDEAQRDA
TDTVHRIKDNLHKLEQENQTNLRLTDDIARLSDTEKQLQKRLQELESHELPKAKQARHIA
VSERTAGSATREKELEESAEKTGKLRDLIRQVDQACAAVSTASKVGSKHKLAQVQQQLTN
LEQAIAHLHGVAERNTKDLELARQQVHEHKIRQRELTDCVQLRQLRSQMGQLTLRIEDLS
NRLASCHSVTGTDQDLVKETKRLSSEEERLQAEKHAVTNQLGQLTAKLQYLERDLKEKYA
ESDREYLDMMYQLKTTELACSDLERYYNALDRAILAYHAAKMSDLNKIIRELWRSTYRGN
DIDYIEICSEEEAATAASNATRSRRTYNYRVVMVKATGGVAAPTASSRAAKSKSVQSYEA
RLDMRGRCSAGQKVLASLIIRLALAEVFCLHCGVLALDEPTTNLDRENIESLAYALVEII
KSRKQQKNFQLIVITHDEDFVELLGRSDFVEHFFMLSRNTQGLSEIRKVPIEEHFH
NT seq
4131 nt
NT seq
+upstream
nt +downstream
nt
atggctctagtagaaagaatgagtatccttgggatccgtagttttgggcatgaaacgccc
cagaagattgagtttttcacccctgtaactcttatcctcggtccgaacgggacgggcaag
actactatcatcgagtgcctgaagtactctacaacgggagatcttcctccgggttcaaaa
acgggttgttcgttcatccacgatccacggatcgcccgggaaacggaagtgaaagccaaa
gtcactcttcaaattaaggatgttcgcggtcagccaatgattgtctccagagcgttggtc
gctacgcaacgagataaggccaagcaaggcactctgaaaacacttgatgggtctatcaaa
cgtcagcttcctgacggcagcataaccagtatcagttctaagtgcgcggaaattgatcaa
gagatggttaccagtcttggtgtctccaaagccgtgctggaaaatgtgatattttgtcac
caagaggattctaactggccacttcaagaggccaagtctgtaaaacaacgttttgacgac
ctgttcgcttcttcgcgctatgtgaaggctctggacgccatgcgaaagtgcaaacaggaa
aaggatactacgatcaaagtgtacaaagcagagctgaaacatctgagcaaaagtcgtgac
gaagccgcaaagattcggtgtgaacgggaagaactacagcattcaatagaaaaacaagaa
cagttacttgctagcgtgacagcaaaactcaatcccatcgttgaacaacttaatttgtac
aaacagaagtacgctgaacttattcaactgcaagctcaactaaaatcacatgaagccgag
aaagctcatttggaagaggctattagtaatcttcgagccaatataaaagaagaattcgat
gggaataatgaagaactgtctactctggtagaggattctgggacggaacttgagcgaaaa
cagcttaatctatccagattggaagaggccgaacagacgaatcgggtgaaaatgcgtgaa
tcggaagctcagcggaacaaggcgatggtggaaattgcacagttggagctgcatgtgaag
aatttatcggagacgatatccaaccgaaacagtttactgcgatccgctgtagagcaatgt
ggtctggcagatgtcgcatcgtttctggagtctgatagcacaatgactgaagaacatgtc
atgtctgtgacttctgaactgcaacggcacatggatagtaccatggaggcggagttacgt
ctaaaggagcgaatgcgaaaatttgaggcggaggaaacggaacgcgtgaatcaagccatt
aacgagctagctcgcgtcgaacataaccatgaagaggctcagcgctgcttgagggagacg
cgttctgaaataacttcgctgaaaagacgtgtggaaaatgccaagtcagtcatctcgcag
atggagagtgtcagaaatgaactgttgaatgcagaggctcatgtcgaccagttgtgcacc
agcagcgagttgaaagatacacgcgagcaactgcaacatctctccgaagttcggaaggct
actgaacaatctttgctaacactggatgagaaaattgcaatgttgcaacaaaactcctca
caacgccagcaactggacgtccttaggaaagatcgcgacagcaaattcgaatcagcccgc
aaaatacgcagtcgacatctcgaggccttagaacaggtctttggaaccaattccgttcct
acaattatctcagaagttgatatcgcagtcgcacttgatcgctcgaagggacgtgcccaa
cagaccaccaccattcaagacagactacgtcattccttcttgacccgattgtcatcactg
gagcagagtacacgggaggcaagaaaacgccttgccaaatatgaacaagagaagtctgtg
ctggagacgaagacaaagttcactcgatcgcaactacaaggaaagcaaaaacaagcagat
caaatggcagaacgcatcctcagcgcagcgggttccgctgatttggaacagtgcctgtcg
aggttacaacagagacggaaacttctagaagaagaatgtgcgaatgaacagggaagtctc
tatctatggtgtaaatttcgggatcgtttggcacgttcggatccggactgtcccgtctgc
catcggcagttgtcagaccgttcagagcaggacgaacttctgaccgagatgaaccaacgc
atcgaatcaatgcccggcgaatttgagcgaaaaaaagttgagcttgctcagctggtgacg
caacatgagacgttgctggagctccgaccgatctactcagaacttgaacacttacgcaaa
acagatatccctgctttggaggcacaactgaatacagagctggaaagcctacagactgct
agggacaacagcgaacaggagactgcacgtctggaagcatgccatgcggacgaagcttta
gccagatccattcaaggcgacctggctgtattcgaacggatggaaaatgatatcatagaa
ctcagcggaaaaattgcgcgactgcaagcagaaagtggagagaccatggaaggcaccgag
accgtggatgccctccaggaagaacgaagaacactccgtgataaacaaatttcggtgact
tcggaaatgactagactacaggatcatgtgcagcagttggacgaagctcaacgtgacgca
actgatacggtgcatcgaataaaggataacttacataagttggagcaggaaaaccaaact
aatctgcgtcttactgatgacatcgctcgcctgagtgacaccgaaaaacagcttcagaaa
cggcttcaagaactggaatcacatgagcttccgaaagcaaagcaggcgagacacatcgcc
gtaagtgagaggactgctggttcggcaacccgggagaaagaacttgaagaatcagcagaa
aagaccgggaaattgcgcgacctcatccgtcaagttgaccaagcatgtgctgctgtttct
acagcttcgaaagttggttcaaagcacaagttagctcaagttcaacaacagttgacgaat
cttgagcaagctattgcccacttgcatggagtcgcggagcgaaacacgaaagacctggaa
cttgctcgccagcaagtgcatgagcacaagattcgtcagcgtgagctgaccgactgtgta
cagttgcgacaattgcgaagccaaatgggccagttgaccttgcgcatcgaagacctctca
aatcgcctcgcttcatgccattccgttactggaactgatcaagacctcgtcaaagaaaca
aagcgattgtcctcagaggaagaacgactccaagccgagaaacatgcggtcacgaatcaa
ctgggtcaacttacagcaaagttgcagtacctcgaacgtgacctgaaagagaagtacgcc
gagtcggacagagaatacttggacatgatgtaccagctcaagaccacggagctagcctgt
tccgacctcgaacgctattacaacgctctggatagagcaatcttggcttatcatgcggcg
aaaatgtccgaccttaacaaaattatccgcgaactctggcggagtacttatcgaggaaat
gatattgactacatcgagatatgcagcgaggaagaagcagcgactgcagcttccaacgct
acacgctcccgtcgaacctacaactaccgtgtggtgatggtcaaagccactggtggcgtg
gctgctcccaccgcatcaagtcgagcagcgaaatcgaaatcggtacagtcatatgaggcc
cgtttagatatgcgcggccgttgctcagctgggcaaaaagtactggctagtctaattatc
cgactagctttggcggaagttttttgtctgcactgcggagttctcgcactggatgaaccg
acgacgaacttagatagagagaacattgaaagcctggcctatgcgttggtcgaaattatc
aagagccgcaaacaacagaaaaactttcagctgatagtaattacccatgatgaagatttc
gttgaattgttgggacggtcggactttgtagagcatttctttatgctttcccgcaatacc
cagggtctatcagaaatccggaaggtgccgatcgaagaacacttccactaa
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integrated database retrieval system
