Opisthorchis viverrini (Southeast Asian liver fluke): T265_01106
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Entry
T265_01106 CDS
T04902
Name
(RefSeq) hypothetical protein
KO
K18681
DIS3-like exonuclease 1 [EC:3.1.13.-]
Organism
ovi
Opisthorchis viverrini (Southeast Asian liver fluke)
Pathway
ovi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ovi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
T265_01106
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ovi03019
]
T265_01106
Messenger RNA biogenesis [BR:
ovi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
T265_01106
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
OB_Dis3
Rrp44_S1
CSD2
Sulfotransfer_3
OB_HELZ2
Rrp44_CSD1
DUF6760
Motif
Other DBs
NCBI-GeneID:
20315294
NCBI-ProteinID:
XP_009163313
UniProt:
A0A075A0Y0
LinkDB
All DBs
Position
Unknown
AA seq
923 aa
AA seq
DB search
MVTLTDASLVKHQPELKEALASRSEIAVNGVQHRNRAMDGDVVVIRLLPRDQWGHVSSNI
NATESNAAEVVSTAVGAVEQATEADRADSTPAAALWPSGFVVGVLSRNWRDYVCTYIPES
DALVEQTGWVLVTPWDRRIPRIRLHTTQAATLAKERFVVRIDSWDAGSNYPHGHFVHSLG
PIGDLETETQTLLIEHNLPVRAFSDAQLRELSPYSVQRPWKVDPAEVARRRDLRSPAVSG
NPASEDVLIFSIDPQGCQDVDDTLSVRWLDPIVMEDGSTHRRLQLGVHIADVTFFVPPGG
FVDAEARRRTTSVYLADRRYDMLPGLLSGDLCSLWSGVDRYAVSVLWELDMDSFDVLDVW
YGRTVIRSAYKLTYEVAQQIYDTPATKNDTAAGTSHAEQLLAKMGGSEKLGELIPELKGL
KKLAELVKLESAIRLLVDVASTVRTRRVARGGLELDSIEIGVRFANPETRSGKLEDLVPK
EVIFSYLIQPLEMHGTVAELMIFANHWVARRCLETYPDRSCLRRHPPPRPEFFDELQRCA
ASRGFQLDIESNRSLGASLAKADDPNDPEVKRVLLQLTTRAMTNALYFSTGVDNLTREQF
AHYGLALNLYTHFTSPIRRYADVLVHRVLLTALGDCRSAISGRPDEVLGRSAKPPQLNPT
VFGPEHLMPSEELSEICQHMNEQHWAAQQVQRASVELFQALFFKDRAENDPIRIADGIIC
QLRGNNGFVVLVSRYGVRGAVCVKDHKGQVAWVSDNSRVTWMPPDSGFEVSRVYAADRGD
CGQLEVRNPSTGAVQCYRVFDHVTVSIAVSDSIAHGLGLRLQLLSGPRSATDAVETTLAK
TPSVPSEEEQKAIKANLIESVQTSDAQRRRKRALDEQAALDDEIDSLDQASLIGRLHDPT
SLHHRFHKILRQCAPSNLTDESS
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atggtaaccctaacagacgccagccttgtcaagcaccagccagaactgaaagaagctctg
gccagccgaagtgagatcgctgtaaatggggtacagcatcgaaatcgtgccatggatggt
gacgttgttgtcattcggctcttgcctcgtgatcagtggggccacgtgtcatcaaatatt
aatgcaacggaaagcaacgctgctgaggttgttagcacggccgttggtgccgtggaacag
gcgaccgaagcagatcgtgcagattccacacccgctgctgccctatggccgagcggattt
gttgtgggtgttctgagtcgaaactggagagattacgtgtgcacttacataccggaatcg
gatgcactcgtggagcaaactggttgggttttggtgactccgtgggatcgacgtataccg
cggatccgactgcataccacacaggcggcgacgcttgctaaagagcgatttgtggttcga
atcgattcttgggatgctggatccaattatccacatggccatttcgttcattctctcgga
cccataggagatttggagacagaaacacagacgcttttaatcgaacacaacttgcctgtt
cgtgcgttttccgatgctcagcttcgtgaactgtctccttatagtgttcaaagaccgtgg
aaagtggacccagccgaagtcgcgcgccgtcgtgatcttcgatctcccgccgtatcagga
aatcccgcatccgaagatgttctcattttcagtattgatccacaaggctgccaggatgtg
gacgacactttgtctgttcgctggctcgatccgatagttatggaggacggtagcacacat
cgccgcttgcagttgggtgtccacatagctgacgtgaccttttttgttccccctggtgga
tttgtggatgccgaggctcggcgacgtacaacaagcgtgtatctggccgatcgtcgttac
gatatgctgcccggtttgctaagcggtgatttgtgttcattatggagtggagtggatcgt
tacgccgtcagtgtattatgggaactcgacatggattcattcgatgtattggacgtgtgg
tacgggcgaaccgtaatccgttccgcctacaaactcacctacgaggtcgcccaacagatc
tacgacacaccagcgacgaagaatgacacagctgccggaacatctcacgccgaacaattg
cttgcaaagatgggcggctcggagaagttgggtgagctgatcccggaactcaaaggatta
aagaagctagcggaattggtgaagctggaatcggcgattcgcctgcttgtggatgtcgcc
tcaactgttcgaactcgtcgtgtggctcgcggtggtctggaattggatagcattgagatt
ggtgtgagatttgccaatccggagacacgcagtggaaagttggaagatttggtccccaaa
gaggtaatattctcttatcttatccagccgttagaaatgcatggaaccgtcgcagaactg
atgatattcgcaaaccactgggttgcacgccgctgtctcgaaacctatccggataggtct
tgtctccggcgccatccacctccacgaccggagttctttgatgaactgcaacgatgtgcc
gcctctcgcgggtttcagctggatatcgaatccaatcgttctttgggtgcatcgcttgcc
aaggccgatgatcctaatgatccagaggttaaacgggtcctactgcagctgactacgaga
gcgatgaccaatgcgttgtatttctccaccggtgtggacaatctgactcgtgagcagttc
gcgcactatggtctagcattgaacttgtacacacatttcacctcaccgatccgtcgctac
gctgatgtgcttgttcaccgcgtacttctaacagcactgggagattgtcgttcggcaata
tccggccggccagatgaagttctgggccgcagtgctaagccccctcagttgaaccccacg
gtgtttggtccagaacatctgatgccgtcggaagagctctcagagatttgtcagcacatg
aacgagcagcattgggctgctcaacaagtgcaacgagctagcgtggaactgtttcaagcg
ctgttctttaaagaccgagcagaaaatgatccgatccgaattgcagatggaatcatttgc
cagctccgaggcaacaatggattcgttgttttggtttctcgctacggcgtccgtggagcc
gtttgtgtaaaggaccacaaaggtcaagttgcctgggtttcggacaattccagggtcaca
tggatgccgcctgatagtggtttcgaggtgagtcgggtctacgctgctgatcggggtgac
tgtggacagctggaagttcgtaaccccagtactggtgctgttcaatgctatcgtgtattt
gatcacgtgactgtaagtatcgccgtctctgattccatcgcgcacggccttggtcttcga
ctgcaactactcagcggaccgcggtcggccacagacgcggtggaaacaacattggccaaa
actccttccgttccaagcgaggaagaacagaaagccatcaaggcgaaccttattgagtcc
gttcaaaccagtgatgcacagcgtcgtcgaaaacgggctttggatgagcaagcagcccta
gacgatgaaatagactcgctggatcaagcgtctcttattggtcgactgcacgacccaact
tcacttcaccaccgatttcataaaatcttgcgtcaatgtgcgccgtcgaatttgacagac
gagagtagttga
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