Opisthorchis viverrini (Southeast Asian liver fluke): T265_01304
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Entry
T265_01304 CDS
T04902
Name
(RefSeq) hypothetical protein
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
ovi
Opisthorchis viverrini (Southeast Asian liver fluke)
Pathway
ovi03013
Nucleocytoplasmic transport
ovi03015
mRNA surveillance pathway
ovi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ovi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
T265_01304
09122 Translation
03013 Nucleocytoplasmic transport
T265_01304
03015 mRNA surveillance pathway
T265_01304
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ovi03019
]
T265_01304
03041 Spliceosome [BR:
ovi03041
]
T265_01304
03009 Ribosome biogenesis [BR:
ovi03009
]
T265_01304
03012 Translation factors [BR:
ovi03012
]
T265_01304
Enzymes [BR:
ovi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
T265_01304
Messenger RNA biogenesis [BR:
ovi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
T265_01304
mRNA cycle factors
Stress granule specific factors
T265_01304
Spliceosome [BR:
ovi03041
]
Complex C
Other components
EJC/TREX
T265_01304
Ribosome biogenesis [BR:
ovi03009
]
Eukaryotic type
90S particles
Helicases
T265_01304
Translation factors [BR:
ovi03012
]
Eukaryotic type
Initiation factors
eIF-4
T265_01304
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
DEAD
YfjC
Med3
tRNA-synt_1b
Motif
Other DBs
NCBI-GeneID:
20315492
NCBI-ProteinID:
XP_009163574
UniProt:
A0A075AA29
LinkDB
All DBs
Position
Unknown
AA seq
664 aa
AA seq
DB search
MPKDHCQCSALIGIFDAKLERLLKALEDSGAKNAATWAKVDKGHSSLNQNLAMSIPGPMA
AKKVVQLSDAAIKAATASLVDRRLKENRLINWGSFSGKITRAKLASLINRSTQDGYAKRE
EILERAGSIQKANPMIRRLSEDRPLDARKIGHNRSGVEARNRLPPGTKPDDPKLMTKPIV
VISPCAPESRPMKPAGSPDSSFYSTTTGLSPTKGRDALEETNPTCKQRPNYVELSTLISV
SEGTAAAAHSSTKSQPLNWTESDVRGQGAKPISSSTPSKAASLLVDPTVAQYPDTQSHKH
DYSHPENPSYIQLSTLIAGGSGVHTNTEEERLQPKKPYKTRHIRKLLAGFKMLDTQLRET
QALVLSPTRELASQIQKVILALGDYMNVHCHACYGGTNVGEDIRKLDYGQHVVSGTPGRV
FDMIRRRNLRTRAIKLFILDEADEMLDKGFKEQIYDVYRYLPPGTQVVLLSATMPHEILE
MTSKFMTKPVRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTVTQSVIFCNTK
RKVEWLTEKMRKNNFTVASMHGDMVQREREEIMRDFRAGESRVLITTDLWARGLDVQQVS
LVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKTEDIRILRDIEQYYSTQIDEMPMNV
SDLV
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaagaccactgccagtgttccgctttaatcgggatattcgacgcgaaattagag
cgtcttttgaaggcattggaggactcgggcgccaagaatgcagcgacctgggcgaaagtc
gacaagggacattcctcgctgaaccaaaacctcgcgatgtccataccgggtcccatggct
gcgaagaaagtcgtacaactttctgacgcggctataaaagccgccacagcgtctctagtg
gacagacgactaaaagaaaacaggctgataaactgggggtcgttctccggaaaaatcaca
cgagcgaagctggcaagcctgataaatcgctccacgcaggatggctacgccaaaagggaa
gaaatcttggagcgggctggcagcattcaaaaggccaacccaatgatcaggcgcctatct
gaggatcgtcctctagacgcgcgcaagattggtcacaacaggtcaggagtggaagcacga
aacaggcttccaccgggcactaaaccagacgaccccaaactcatgaccaagccgattgtg
gtcatatccccctgtgctcccgaaagcaggccgatgaaaccagctggttctccggacagc
agtttttattcgaccaccacaggcctctcgcccaccaaaggcagggacgccctggaggag
acaaatcccacatgcaagcagcgcccaaactacgtggagctatcaacgcttatctccgta
tcagagggcacagctgcagccgcgcactcgtcaacaaagtcacagcccctgaactggact
gagtcagatgtgcggggacaaggagcgaagccaatctctagctccactccgtcaaaagct
gcatccctgcttgtggacccaactgtcgcccagtaccccgacacccaaagccacaaacat
gactacagccatccggaaaatccctcgtacatccagttgtccacgctgatcgctggcgga
tcgggtgtgcacacaaacacggaagaagagcgactgcagccaaaaaagccatataaaact
cgccatattagaaaactgctggctggcttcaagatgttggatactcaactgcgtgaaacc
caagcacttgtcctatcaccgacacgcgagttagcttctcaaatccagaaggtcatcctt
gctcttggcgactacatgaatgttcactgtcacgcttgctacggtggaaccaacgttggc
gaagatatcagaaagcttgactatggtcagcacgtagtttcgggcactcctggacgagtt
tttgatatgattcgtcgacgaaatctgcgtacaagagcaatcaagttgttcattctggac
gaagccgatgagatgctagacaaaggattcaaggaacaaatctacgacgtctaccgttac
ttacctccagggactcaggtcgttcttctctccgcaacaatgcctcacgagatattggaa
atgacctccaaattcatgacgaagcctgttcgcatactggtcaaacgtgatgaactgact
ctggaggggatcaagcaattttttgtggccgtggaacgagaggaatggaaattcgacaca
ctgtgtgacctgtatgatacattaacagtcacacagtctgtcattttctgcaataccaaa
cgtaaggtcgaatggctaacagagaaaatgcgcaagaacaatttcaccgtggcctcaatg
catggagatatggtacaacgcgagcgggaggaaatcatgcgtgattttcgagccggagaa
agccgcgtcctgatcacaaccgacctgtgggcgcgtggattagatgtacagcaagtgtct
ctggtcatcaactacgaccttcctaataatcgtgaattgtacatccatcgaatcggtcgc
tcgggtcgtttcggtcgcaagggtgtagcgatcaattttgtcaagaccgaagacattcga
atccttcgtgacattgaacagtactactccactcaaatcgatgaaatgccaatgaatgtg
tccgacctggtttaa
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