Opisthorchis viverrini (Southeast Asian liver fluke): T265_01345
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Entry
T265_01345 CDS
T04902
Name
(RefSeq) hypothetical protein
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
ovi
Opisthorchis viverrini (Southeast Asian liver fluke)
Pathway
ovi04140
Autophagy - animal
ovi04142
Lysosome biogenesis
ovi04145
Phagocytosis
ovi04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ovi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
T265_01345
04142 Lysosome biogenesis
T265_01345
04140 Autophagy - animal
T265_01345
04148 Efferocytosis
T265_01345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ovi04131
]
T265_01345
Membrane trafficking [BR:
ovi04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
T265_01345
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps39_1
CNH
AlkA_N
Clathrin
Motif
Other DBs
NCBI-GeneID:
20315533
NCBI-ProteinID:
XP_009163615
UniProt:
A0A075AA98
LinkDB
All DBs
Position
Unknown
AA seq
1260 aa
AA seq
DB search
MHEAFFPICLLRDYPYALECLTCYDNFLIVGTKQGLLLVYEVTPKSLNHPVYFIPPITYR
DGPRKSIRLRLDDLSLTSDSTTAQGSDVSSVPHPSFSTRVYTTRTFGRKPILQLTALPDL
DLLLALADGQMNVYQLQNYQLVTIVPMSKGASLFAHFTTPAKGKQESNPTKGTVSSGSDY
IAACLATSVNLRICVAVKRRLMLWRWDPLGQNFVSPGGSADTITPDWLSEVTVSDTARVL
QFYGSTHIILGTRAEYLQISLTTGDIRSISNPGRNQLPLISFLPACFHTPTPDVQVHQLV
SGDRQHSTDSQADALSLSSTTSAVAAEHNSSSSSNAASLTFSDAPLGLGKDDVLDVLSSS
LERRSMTKIRWTGAPRHLHIYPPYIIAAMEQFLEVRVADPCELVQQIPIARVQAFCHQGG
WLYVATAPAYTSLNESTRSNPSPQRSSPTIPEVPGKSPRPKTTESGNEVWVILPANRTTL
VERLVKVKEFDLALLLAKEAPWMGQNPIETRPIAILQAYYLYQQQEFARSLQIFTQQLVD
PSHVLGLFPDLLSDEMQSERQYPVGHVEFDLALLLAKEAPWMGQNPIETRPIAILQAYYL
YQQQEFARSLQIFTQQLVDPSHVLGLFPDLLSDEMQSERQYPVGHVPVDRAQFSNAAEPV
ITYLLTWRRLVHQALSYNRRRIFSTSSILTRDFHVSANSGEIADVTIRCYPIVDGSPTIT
SALALLGVIDTCLLKCYLATNTARVAPLLRQANSCNLEESEKTLLEHHRYQDLVMLYQAH
GLHRKALAVLQQLGLLRLKRSGTKLTPSTFEHAAEGIVCVDATKVYSTELEQLGDPRHMV
NYFQNLGPTSFDLVAEFAGWIMHNYPIAWMRIFTAWERQLHTERLSAMALTQMTGREKKS
SVSAVPSLAYRGQVVKFLESQAIHLMIPFLEHLIFTRLDADVDSDEDEDEEINGLSTEGI
LDLEECLGPSDDAAISERGVLETSAGQTSRIDDHYLKDGAPLSYAVRNSLWPLPGSKRIS
AASSDFADPDLLPPIIRHSEDADPTELHTRYAAALMQGALTLLIHVLDDWDRAVSHCANV
YQRVSHTMLEEKLPTSSHIDFNDKRASSVQPTPGLPVTTLSRSPARDSLGPNLEFCGSPA
AASHQLGDGSIVELEAGGHEERDIFFLLVQICIQPPEPASLGIIIPEIPGETSIISEGFS
PKPEKAIEVLRRFGDRVDAAKVVRILTNTRLFDVAHFLKDVRQASEKLSCRPLQLKLIPV
NT seq
3783 nt
NT seq
+upstream
nt +downstream
nt
atgcatgaggccttcttccccatatgccttctacgtgactatccatatgctctggaatgt
ctgacctgttacgacaactttcttatcgttggtacaaagcaaggcctgttattagtctat
gaagtgactccgaaatcattgaatcaccccgtgtacttcataccaccgatcacctatcga
gatggacccagaaagagtatccggttaagacttgatgacttatcactcacttctgattcc
acgacagcacagggttctgatgtgtcttccgtaccccatccctcattttccacccgagtc
tacaccactcggacatttggaaggaagcccatattacagctgactgcgctacctgatttg
gatcttttgctggcgctagctgatggccaaatgaatgtttaccagttgcagaattatcag
ttggtcacgattgtccccatgagtaagggagcctcattgttcgcacactttacgacacca
gctaaagggaagcaggaatccaacccaacgaaagggaccgtatcttctggaagtgactac
atcgccgcgtgcttagccacctcagtgaatttgcgaatttgtgtggccgtgaagcggcgt
ttgatgctctggcgttgggatccactaggacagaattttgtctctcccggtggatcagcc
gacacaatcacaccggactggttgtcggaggtaaccgtctccgatactgcgcgcgtcctt
caattttacgggtcaactcatattatcttggggactcgtgccgaatatttgcaaatctca
ttgaccactggagatattcgatccatctccaaccccgggcgtaaccaattacccctgata
tcctttctacccgcttgctttcacacgccaactccagatgtgcaagtccatcagcttgta
agtggagatcgtcagcattcgaccgacagtcaagccgatgcactgtccttgtccagcacc
actagcgcagttgcggcggaacataactcgtcgtcttcatcgaatgcggcttcactgacc
ttttctgacgcaccacttggattgggaaaagacgatgtacttgacgtgctttcctccagc
ctggagcgtagatccatgaccaaaattcgttggactggtgcacctcgccatttacacata
tatccgccgtatatcattgcggcaatggaacaatttttagaggtacgggttgcggatcca
tgcgaactggttcaacagataccgattgctcgcgttcaagcgttttgccatcagggtggc
tggctttatgttgcgacagcccctgcctatacaagtctgaacgagagcaccagatccaat
ccttcacctcaacgctcctccccaactataccagaagtgccaggcaaatctcctcgacct
aagaccacagagagtgggaacgaagtgtgggtcattttaccagccaatcgaaccacattg
gtcgaacggcttgtcaaagtgaaggagtttgatttagccctactcttggccaaggaagca
ccgtggatgggacaaaatccgattgagacacgaccaatcgccatcctacaggcttactac
ctgtaccaacagcaagaattcgcacgctcccttcaaattttcacccagcaattggtcgac
ccttctcacgtgttggggcttttccctgatttgctttccgatgaaatgcagtcagagcgg
cagtatcctgttggtcacgtggagtttgatttagccctactcttggccaaggaagcaccg
tggatgggacaaaatccgattgagacacgaccaatcgccatcctacaggcttactacctg
taccaacagcaagaattcgcacgctcccttcaaattttcacccagcaattggtcgaccct
tctcacgtgttggggcttttccctgatttgctttccgatgaaatgcagtcagagcggcag
tatcctgttggtcacgtgcccgtcgaccgtgcgcaattttcgaatgcggcggaaccggtc
attacctatctgctaacttggcgtcgactcgtgcatcaagcgctttcgtacaatcgcaga
agaatcttctctacaagctccatcctgacaagggactttcatgtttcggccaactccggc
gaaattgcagacgtcaccatccgctgttacccgattgtggatggtagtcctacaatcacc
tcagctttagcactccttggtgtaatcgacacctgtttactaaagtgctacctggccacg
aacactgcacgagtcgcaccgctgttacgtcaggcgaattcgtgtaacctggaggaatcc
gagaagactcttcttgaacatcatcgctatcaggatctcgtaatgctttatcaagctcac
ggactgcatcggaaagcacttgccgtgctgcaacagctaggccttttgagattgaagcgg
tccggaacgaaattgaccccatccacctttgaacatgctgctgaaggtatagtctgtgtg
gacgcaaccaaagtttattctacggagcttgaacagcttggagacccacggcatatggtg
aactattttcaaaatctcggtcctacctccttcgatttagtagctgagtttgctggttgg
ataatgcataattacccgatcgcgtggatgcgcatttttaccgcatgggagcgacagtta
cacacggaacggctgtctgcgatggcacttacgcaaatgacgggtcgggagaaaaagtct
agtgtttcagcggttccttcgttagcctatcgaggtcaggtggtgaagttcttggaatca
caagctattcacttgatgatcccttttttggagcacctgatcttcacgcgactagatgct
gatgtggacagcgatgaagacgaggatgaagagattaatggactcagcactgaaggtatt
ttggatttggaagagtgtctggggccttctgacgatgcggccatctccgagcgtggtgtt
ttggagacttctgccggacaaacctctcgtattgacgatcattatctcaaggacggagct
cctctttcttatgctgtacgtaattctctatggcccctaccaggatccaaacgtatttcc
gcagcatcgtcggattttgcagatccggacttattgccgcccatcatacgacactcagaa
gatgctgatccaactgaattgcacacacgctacgctgcagcactcatgcaaggggcccta
actctgctgatccatgtgctggatgactgggatagagccgtatctcattgtgcaaatgtc
tatcagcgtgtcagtcatacaatgttggaagaaaagctacctaccagttctcacatagac
tttaacgacaaacgcgcgtcttccgttcaacccactccaggcctcccagtaactaccctg
tcacggtcccctgcccgtgactcgcttggtccaaacctagaattctgtggttcaccagca
gctgcatcgcatcagctgggtgacgggtcgattgttgaactggaagcaggtggccacgaa
gaacgtgatatattcttccttttggtacaaatctgtatacagccaccggaaccggcttca
ctagggattatcatcccagaaatcccaggtgaaacttcaattatctccgaggggttctcg
cccaagccggagaaggcaattgaagtcttgcgtcgtttcggtgaccgcgtggacgctgct
aaggtggtgcgaatcctgacaaacaccaggctatttgacgtggcacattttctcaaggac
gtacgtcaggcttctgagaaattgtcctgtagaccccttcaactgaaactgattccagtc
taa
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