Opisthorchis viverrini (Southeast Asian liver fluke): T265_01934
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Entry
T265_01934 CDS
T04902
Name
(RefSeq) hypothetical protein
KO
K10610
DNA damage-binding protein 1
Organism
ovi
Opisthorchis viverrini (Southeast Asian liver fluke)
Pathway
ovi03420
Nucleotide excision repair
ovi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ovi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
T265_01934
09124 Replication and repair
03420 Nucleotide excision repair
T265_01934
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ovi04121
]
T265_01934
03400 DNA repair and recombination proteins [BR:
ovi03400
]
T265_01934
Ubiquitin system [BR:
ovi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
T265_01934
DNA repair and recombination proteins [BR:
ovi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
T265_01934
TCR (transcription coupled repair) factors
Cul4-CSA complex
T265_01934
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_RSE1_1st
Motif
Other DBs
NCBI-GeneID:
20316122
NCBI-ProteinID:
XP_009164336
UniProt:
A0A075A0S2
LinkDB
All DBs
Position
Unknown
AA seq
1330 aa
AA seq
DB search
MAHFYHVTTQRPTAIIKTCTGHFTGPDDLNLLICKNNYIEVFEVTSEGLRLIRDVPINAK
IVAACLFRRKERQTDSLFILTHKAGFALIECARKGDDVHFVTVVSGSVEDCGARLIDQGF
DVLVDPGANCVVVRLYHGLLRIIPLNGIGEKLSTDSLEVSQYAANTYNVRIEEGNIVDMA
FLHGYTLPTFAMIYEDELVLHMKTYEISGREPALRNVQLTLDSIEPDSKLLIPVPKPFGG
VILVGDNIIYYHTKDGPHISQYIPQAKASQVLCYAAVDAQRYLLGDMAGRLYMVHLLAED
HTPSGNGLLGSTSSAAVPSARIGSIRIELLGETATPESIAYVDNGVVFIGCTLGDSQLIR
LNPDPDPERNSYITVLENYTNIGPIVDMVLLESKGQNQLITCSGAYKEGTLRIIRNGIGI
HEHATIDQDLIKGAWCFPLESDRYDDSIVVSMVGQTQLLRLTDDDITALHLDGFKTDEQT
VYCATLSPMDASTSDNPESSSRSYSVFQHSLLMQATTSGIRLIGIHHLNGSGCLAEWRSP
SGRGISCLSSHGALIVVASGPELYVLRVVGPANQPSFEQAAHRTMSNEVACIDLTPFDHK
RAAYAASQTSTIDEPVDYTVPQLVAVGLWLGYGLALLRLPNLELVHEERFPELLRXPRSV
LLAQLEDMAYLFAAMGDGTLYFYTVCPSADGIVLRDAKRVNAGTGPSMFLKQWRSQCKVN
VFVCSNHPCVIYSIKNKLIFANLNMKEVNFMAPLNGAFYRDCIALVTPTALVIGSVDEIQ
KLHVRTVPLEETPKRLALQDETGSLGVITYRQEVFQEGSGFKPVRSSISLSQKVPKSTSR
LPKTAPSSVSATERKFREVEVSSLLIFNKSTMELMFAHSFYFSQTLVEVAVSIASIEPTD
GSKNMLYAVGTAFLVEEEVEPSKGRIHLFHWDPETARLETVLVHDVNGAVYRLLDFNGRL
LAAINSSVRLFDIKEDSLRLACSFNENIIALFLRRKGDFVLVGDLMRSLTLLLYRPNVNN
FEAIGRHRNPRWTTCIEILDDEHFLAAEVENSLFVVSRDSPENTQEPTVRALLAPSTGES
SCVLPSSVGFKAKATDSSAQSRSDAVDSSSTTQSVDGTGDPTATSTRTASGTSRQRRTSA
PRGTNTAPLGNSNADSTGANVSGEVQRLADCAYIHTGDFINVFVRGNLVMQNNEERWQAI
GHPSHLYGTVSGSIGLIIQVSPVLFAFLKEIESRLAKLVNPVGGFAHDMWRAFKAERIVR
MAHNFVDGDLIETLLDLSSEDKAKLVKGLRIPVNMDEFGVAGSACTSDPETRECTAADLV
KVVEEMARLH
NT seq
3993 nt
NT seq
+upstream
nt +downstream
nt
atggcgcatttctaccatgtgaccacgcagagacccacggccataatcaaaacatgcact
gggcacttcactggtcctgatgatctcaatctgcttatttgcaaaaataattacatcgaa
gtatttgaagttacgtctgagggccttagactcattcgggatgtaccaataaatgccaaa
attgttgcggcatgtttattccgacgaaaggaacgccaaacggattctttatttatcctc
acacacaaggctggttttgctctaatcgagtgcgcgcgcaagggcgatgatgtgcacttt
gtgacagtcgtatctggaagtgttgaagattgtggcgcacggttaattgatcagggattt
gatgtgctcgtggatcccggcgctaattgtgtcgtcgttcgcttgtatcatggattgctg
agaataatacccttgaacggcatcggtgagaagttatccacggattccttagaagtcagt
caatatgctgccaatacgtacaatgttcggattgaagagggaaacattgtggatatggcc
ttccttcacggatacacactcccaactttcgctatgatttatgaagatgaacttgtcctt
catatgaaaacatacgaaatatctgggcgggaaccggcattaaggaatgtgcagttgact
ctggattccattgaacctgactcaaaattgttgattccagttccaaagccctttggaggt
gtcatcttggttggagataacattatctactaccacacaaaggacggaccccacatttcg
caatacataccacaagcaaaggccagccaggttctctgctatgcagccgttgatgcacaa
agataccttcttggtgatatggctggtcgtttgtacatggtccatttactggcagaagac
catactccctcaggcaatggtcttttgggatccaccagtagtgctgctgttccgagcgcc
agaattgggtctattcggatcgaacttctgggtgagacagcaactcccgaatcgatagca
tacgttgataatggggtggtgtttattggctgcactctgggtgactctcagctgattcgg
cttaacccggatccggatccggagcgtaacagttacattacggtattggagaactacacc
aacattgggcccatagtggatatggtgctactggagagcaagggacaaaaccagctgatc
acatgttcgggtgcgtataaggaaggaaccctacggatcattcgcaacgggatcggaatc
catgaacacgcaaccatcgatcaagaccttatcaaaggggcatggtgtttcccccttgaa
tccgaccgctacgatgattccattgtagtttcaatggttggccaaactcaattgttacga
ctaaccgatgatgatataactgcattacatcttgatggattcaaaactgatgaacagaca
gtctactgtgcgacattgtcacccatggatgcatccacttcagataacccggaatcgtca
tcacgatcatattccgtgttccaacattcccttctcatgcaagctacgacttcagggatc
cggttgattggtatacaccatctaaatggatcaggttgcctggctgaatggcgttcgccc
agtggtcgtggcatttcatgtttgagctcgcacggcgcactgattgtggttgccagtgga
ccggaactctatgtccttcgtgtcgttggcccggcaaaccaaccatcgtttgagcaagcc
gcccaccgtacaatgtccaacgaagtcgcctgtatcgacctcacaccgtttgatcataag
cgtgcagcctatgctgctagtcagacgtcgaccattgatgagcctgtcgattacaccgta
ccccagttagttgctgttggcctttggttaggctacggactagcattgctccggcttccc
aacttggaattggtgcacgaagagcgtttcccggaactactgcgtcntccaagatctgtg
ctgcttgctcagctggaagatatggcttacttgtttgcagctatgggcgacggaactctc
tatttttatacagtctgtccttctgctgatgggattgttctgcgtgacgcaaagcgggtc
aatgctggtaccggtccttcaatgttcctcaagcaatggcgttctcagtgcaaggtcaat
gtgtttgtgtgctccaaccatccctgtgtgatttactccatcaaaaacaagctaattttt
gccaatttgaacatgaaggaggtgaatttcatggccccgttgaatggcgctttctaccgc
gactgtattgcgctggtaacaccaacagctctagttattggatctgtagatgaaatacag
aagctccatgtccgaactgtacctcttgaggagacgccaaaacgtttggcgttgcaagac
gaaactggaagtcttggtgttatcacataccgtcaagaggttttccaggaaggctctggg
ttcaaacctgtccgctcctccatctccttgtcacaaaaggttcccaagtccaccagccga
ctcccaaagaccgcaccctcctccgtgtccgcgactgaacgcaaattccgagaggttgag
gtttcatcgctgctcatattcaacaaatccacgatggaattgatgttcgcacacagcttc
tacttcagtcaaactttagttgaagtcgccgtcagtattgcttcaattgagcccaccgat
ggatcaaagaacatgctgtacgccgtgggaactgcttttctggtcgaggaggaagtcgaa
ccttccaaaggtcgcatccatctgttccactgggacccggaaacggcaagattggaaaca
gttctggtccacgacgtgaatggagccgtttaccggttgctcgattttaatggccgactt
ttagctgctatcaacagttcggtcagactttttgacatcaaagaggattctctacgtttg
gcatgcagtttcaacgagaatattattgctctattcctccgccgcaagggtgactttgta
ttggttggggacctcatgcgctccttgactttgctcctctaccgaccaaatgtgaacaat
ttcgaagcaattgggcgtcatcgtaatccacgttggacgacgtgtatagaaatcttggat
gatgaacatttcctggctgcagaggttgaaaatagcctctttgttgtctcgcgtgactcc
ccagagaacactcaagaacccacagttagagccctcctagcaccatccaccggggaatcc
tcgtgcgtccttccttcttcggtcggtttcaaagcgaaggctacggatagctcggctcaa
agcagatccgatgctgtcgactcctcttcgactacccagtctgtcgatggaactggagat
ccgactgcaacatccacccgaaccgcctctggtaccagtagacagcgacgcacaagtgcc
cctcgtggtaccaatacagcaccattaggcaattcgaatgctgattccactggtgcaaat
gtttcaggcgaagtacagcgattggccgactgtgcttatatccatacgggcgatttcatc
aacgttttcgttcggggtaacttggtgatgcaaaacaacgaagaacgttggcaagccatt
ggccatcccagtcatttgtatggcactgtcagtggcagcatcggtctgattatccaagtg
tctccggttctattcgcatttctcaaagagatcgagtcccggttagccaaattggtgaac
ccagtcggaggattcgcgcatgatatgtggcgagcattcaaggctgaacgtattgttcgg
atggctcacaatttcgttgatggtgatctgattgagacgcttttggatttgagctccgag
gataaagcgaaattggttaaaggtttgagaatcccggtcaatatggatgagtttggagta
gccggttccgcttgtacttccgacccggaaacccgtgaatgcactgctgcggacttggtc
aaggtggttgaagagatggctcgtcttcattga
DBGET
integrated database retrieval system
