Opisthorchis viverrini (Southeast Asian liver fluke): T265_01942
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Entry
T265_01942 CDS
T04902
Name
(RefSeq) hypothetical protein
KO
K14308
nuclear pore complex protein Nup54
Organism
ovi
Opisthorchis viverrini (Southeast Asian liver fluke)
Pathway
ovi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ovi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
T265_01942
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ovi03019
]
T265_01942
Messenger RNA biogenesis [BR:
ovi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
T265_01942
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup54
Motif
Other DBs
NCBI-GeneID:
20316130
NCBI-ProteinID:
XP_009164344
UniProt:
A0A074ZXM6
LinkDB
All DBs
Position
Unknown
AA seq
591 aa
AA seq
DB search
MSLFGTQKLFGGTQSSPFGSTPSTSTAQPGFGFSTGSAAPTSLGTFTFGTSSAAGTSGLF
QPAVQKTTASTNLFGLGTGTSPFSTFGANVSKPATSLFSFSAPSTQQATGFFGPQSSLGS
TLKPIQPVTGSLFQTPGVLGGNLALQPQQQQQQQQQQQQNSLDAFFASLCQPLLFGDERD
AIIARWNQLQAMWGTGTGYSAHGIATYTPDNTFARFKAVVYNALPTSTDADGLVCIYLAR
SFSEVLPQRQALQDTLFRLLGGRPNLQLTVEEIRPCVDQENHTEVILKVIERQPAGHITN
IGASDLERYLSSPTVAPQLQSQLCAYKLTSEVRPSPAQLAAYKENPPAGIDRLIWHQACI
DNPFPDRTIPVPLIGFTDLRRRKLDQIAFSRQQSSVLKQIGDLVEELKTGQLTLHQKIAQ
LKRKQIEISHRVLKVLRRQEVHRRAGFAISADEETLRCGLERIWTELTSPRGLRVRFQEV
SASVKTNSENTGNSDKENFASGDRAAALSSCGIDEQLNWNLDADSWAELKEYLFQRQSGI
RELQHLLTEMSATVKIMEENPALTKPPGSALPLLLRSTPNKVSFALNTRAR
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgagtctgtttggaacccaaaaattgttcggtggaacacaatcttctccattcggctca
accccctcgacttccacagcacaacccggtttcggtttttccactggctcagctgctcct
acttcactcggtacgtttacttttggaaccagttcggctgctggaacgtcggggttattt
cagccagctgtccagaaaaccactgcgtctacgaatctgtttggcctaggaactgggacg
agtccgttctctactttcggtgctaatgtctcgaaaccagcaacatcactgttcagcttc
tctgccccgtcaacccaacaagcgaccgggttctttggtccgcagtcctccctcggatca
acgctcaaacccatccagcctgtcaccggatcgctttttcaaacaccaggagttttggga
ggaaacttggctcttcagccacagcaacaacaacaacagcagcagcaacaacagcaaaac
agtcttgatgctttctttgcctcactttgccaaccgcttctgtttggagacgaacgagac
gccatcattgcacgttggaaccaactccaagccatgtgggggacgggaactggttacagt
gcccacggaatagccacctacacacctgataatacgttcgcccgatttaaagcagttgtg
tacaatgcattgccgacaagcactgatgctgatgggcttgtatgtatctacttagcccgg
tcgttctccgaagttttgccgcaacggcaggcacttcaagatacactgttccgtcttctc
ggtggccgtccgaacttacagctcacagtcgaagagattcggccgtgtgtggatcaggag
aaccacactgaagtcatattgaaggtgatcgagagacaaccagcagggcatattacaaat
attggagccagtgacctcgaacggtatttgtcaagtcccaccgttgctccccaactacag
tcgcaattgtgcgcatacaaactcacatcggaggttcgcccttcccccgcgcagctggcg
gcgtataaagaaaacccgccggctggtattgaccgcctaatttggcatcaggcgtgcatc
gacaatccattcccggatcgcaccattccagtccccctaattgggtttactgatttgcgt
cgccgtaaactagatcaaattgcattcagtcgacagcagagtagcgtattgaagcaaatt
ggtgacctggttgaagagctgaaaacagggcagcttactctccaccagaaaattgctcaa
ctgaaacgaaagcagatcgaaatcagtcatcgtgtgctcaaggtgcttcgacgccaagaa
gttcaccgtcgtgctggatttgcaatcagtgctgatgaggaaactcttcggtgcggtctg
gaacgtatttggacggagcttacttcgccgcgtggccttcgtgttcgcttccaagaagtt
tcggcttctgtgaagacgaattccgagaacacaggcaattcggataaggagaattttgcc
agtggagaccgtgctgcagcattgtcatcttgtgggatcgacgaacaactcaactggaat
ttggatgccgattcatgggcggagctaaaagagtatttgttccagcgccagtcggggatt
cgggagcttcagcatttactgacagaaatgtcggccaccgtaaagattatggaagagaac
ccagcactcacaaaacccccaggatccgcattacctttgttgctccgatccaccccaaac
aaagtctcttttgctcttaatacacgtgctcgttga
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