Opisthorchis viverrini (Southeast Asian liver fluke): T265_01946
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Entry
T265_01946 CDS
T04902
Name
(RefSeq) hypothetical protein
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
ovi
Opisthorchis viverrini (Southeast Asian liver fluke)
Pathway
ovi03013
Nucleocytoplasmic transport
ovi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ovi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
T265_01946
03015 mRNA surveillance pathway
T265_01946
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ovi03019
]
T265_01946
Enzymes [BR:
ovi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
T265_01946
Messenger RNA biogenesis [BR:
ovi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
T265_01946
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
AAA_19
Motif
Other DBs
NCBI-GeneID:
20316134
NCBI-ProteinID:
XP_009164348
UniProt:
A0A074ZXN1
LinkDB
All DBs
Position
Unknown
AA seq
491 aa
AA seq
DB search
MQPSSRRAPQEDWGGFLDEIARLNQSPPNQSSVTSDNAKEDSPSSNSKVSVDSNPPSEGE
SVIRPILGRGDGGKKADSIPLKDILKSKLVETDEIDIEVLRSDPNNPLHSAKSFQEMNLK
GPLLQGISAMGFYKPSAIQEKALTSIIGANPQNMIAQSQSGTGKTATFLMAMLSRVNPQH
SYCQCLCMAPTRELALQIVQVGRRMATFMEGVSFGVAVRETEVSVGADGYVTNQIVVGTP
GTVVQWARCTGSVRFDPSRLQVFVLDEADLMMEEEGFLNISQRIKRKLSPSCQILLFSAT
YGDDVVEFAREFVPNPIEIRVKRTELSLKNIKQYYLLFDDWTVKYQALTEIHADFGAGQA
IIFCATRQEASWLHGRMNLDGHRVVILSGDLELFERQRVLEQFRSAAYRVLITTNLCSRG
LDIPQVNLVINWNMPVTRSGSADCETYLHRIGRSGRFGKEGMAVNFITTEEKHLIGELEA
HFREFPSFCLT
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgcaaccttcgtccagacgggccccccaagaagattggggcggttttttggacgagatc
gctcggttgaatcaatctcctcctaatcaatcctctgtaacgagtgataatgccaaagaa
gactctccctcaagcaattccaaagtttcagtcgattctaatcccccctccgaaggagaa
agcgtgattcgtcccattcttggacgtggtgacggaggaaaaaaagcggactccatccca
ctgaaagatattttaaaatctaagttggtcgagaccgatgaaattgacattgaagttctg
cgttctgatccgaacaatcctttacattcggccaaatcctttcaggagatgaacttaaaa
ggaccacttttgcaaggaatctcagccatgggtttctacaaaccgtccgccattcaagag
aaggccctaactagtataattggcgcaaacccccagaatatgattgcccagtctcagtcg
ggcaccggtaaaacagcaacgttcctgatggcgatgttgtcacgtgtgaacccccaacac
tcctattgccaatgcttgtgcatggcgccgacacgggagttggctcttcaaatcgttcaa
gtgggacgccgaatggccacctttatggagggcgtgtcctttggcgttgcggtgagagaa
acggaagtgtctgttggcgccgatggctatgtcaccaatcagattgttgtgggcactccc
ggtacagtagtacaatgggcacgctgtactggctccgtccgtttcgacccgtctcggttg
caagtatttgtgctggacgaggctgatttgatgatggaagaagagggctttttgaacatt
tctcagcgaattaagagaaaactttctcccagttgtcagattcttctcttctctgccaca
tacggtgacgatgtcgtcgagtttgcccgggagtttgtaccaaatccaatagagatccga
gtgaaacgaacagagctttcactcaaaaacatcaagcagtactatcttctgtttgacgac
tggaccgtgaagtaccaggctttgacggagatacatgcagatttcggcgctggacaggcc
atcatcttctgcgcgactcgtcaggaggccagttggctgcacggacgaatgaacctggat
gggcatcgtgtggttattttatcgggcgatttagaactattcgaacggcaacgagtgctt
gaacaattccgaagtgcagcctatcgtgttttaatcacgacgaatttgtgctcgcgtgga
cttgacatacctcaagttaatctggtgatcaattggaacatgcctgttactcgatctggc
tcggccgattgtgagacatacttgcaccgaatcggtcgttccggtcgctttggtaaagaa
ggcatggctgtgaacttcatcacaactgaagagaagcatctcatcggtgaactggaagcg
cactttcgtgagttcccatcattttgtctcacttga
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