Opisthorchis viverrini (Southeast Asian liver fluke): T265_02049
Help
Entry
T265_02049 CDS
T04902
Name
(RefSeq) hypothetical protein
KO
K10876
RAD54-like protein 2 [EC:5.6.2.-]
Organism
ovi
Opisthorchis viverrini (Southeast Asian liver fluke)
Brite
KEGG Orthology (KO) [BR:
ovi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ovi03400
]
T265_02049
DNA repair and recombination proteins [BR:
ovi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
T265_02049
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
ResIII
Motif
Other DBs
NCBI-GeneID:
20316237
NCBI-ProteinID:
XP_009164461
UniProt:
A0A075A0Q2
LinkDB
All DBs
Position
Unknown
AA seq
2081 aa
AA seq
DB search
MLRCDPYWYTGEKPGRCVPRTSTDFQCLTIDVFGALPSGGNTGSALLKLQEEQVHAPTMV
DTKIFGNGRGSKNQEWRDVASFHVTDPLNAKDELSSSSSIKLNASRHKKRCLFVVSAYAP
TDCSSDAEKDTFYRDLSGLIRQAKSTDIVILAGDLNAQVGRLSSLESHLGGRFGVDARRT
DNGDRLLQLCADHELFLASTNFQHRRSHLRIERISGLIHNEPIEHTSTSNIHLSPLFADG
LTNADSCMPAEVGENNVPLLSREVEADETSAKRLKTAASECLTPLDGSLDSRLSEVVIKP
EDETLCRMNVTDDCTVEELVGAEESSTDVSSTKPCDSTPRSASLSSSASANLFGSWRAGQ
SRDDAILLGDSDDEQEKVHAISCFHFLSFYSLDGEEEPEEPEVETEICELQDAANLMDER
GRVVLNPNRDSETECEICLPPQIARVIKPHQVSGIRFLYDNVIENQQRFETTDGFGCILA
HSMGLGKTIQIIGFLDTIFRYCNVKRVLVIVPINTIQNWQAEFELWLPTDRLKQSRFWSK
VASDSVAVTTADTNTAMSSGEITEESTYDQHTFSELFSEHSGQVDGTTEKPMEQSFGSTE
TVPLCKSEEFERQNGIEQRGNLRSFKLFVVRDVVKTMTQRHQIVNQWFEEGGVLLLGYEM
FRLLLNQKRGVTKAEIRAFSRRKKKTICLDLIEEERREKMLADFHAALIDPGPQLVICDE
GHRIKNSEASISKALKAIKTRRRVVLTGYPLQNNLMEYWCMVDFVRPSYLGTKQEFTNMF
QRPIENGQCIDSTPEDRKVMQGRAHVLHDLLSGFVQRRSHVVLKASLPPKTEIVLLIKLS
PLQRTLYAAFMKSLNSSGPLGWAQVNTLKTYAMCCKPLYRRMQDAKICAARIQFASIHVN
SILSDFVLPFRLLKIWNHPDILWRAMEEHKEAMDFDIEDPSNSASSTAYSNRGLTRSATT
SALSRRTSSQLSLSSSEQSTATEKSPAETPPASSTLNWPPYTTAQRSPNTAFTPPNPFFP
TVPHSLLNRLTSPPSVPAYLYNQTQQNAPTVPPPGTYDWASDAALWGPDYKPGNVEHSGK
IILFLSLLEGCVLAGDKILVFTQSLYTLDLLERILRRLPLPVQKFSEAATSSTCDGQPVA
PGSEFKCTEDCDTDAKMYAVYECRSIKTTATGPDESSESANNVSLPEIDHHGEPVSTKNR
DICEEQANSLDDSQFLESVLGHSGSVVSDEPTSSCVPEATEHQQITKREPLSTTFEQVKE
EEQPEETLRSLHYRLASRLGRSNKPSVWTKNVHYFRMSDRVVDELNPSQQFTRSQVELLM
SFEDKDMQGISQEDLQNCSDLVEPDPVLSSVLQKHRSWITKTPFTHESLLIDRKDYRLTR
VEKRLARQRYEQEKRLSLSYQKAHLFQFQQMQALQHQQLLAAGINPAQLNQSNILSRGSG
FNYRPTYTSGMAAIDAMRQVERQSHTNTDQLQNLYFPSTVENKTVERKIPKGEVMEVIQT
SKGKYLRIVRTGDLFVVKTSSHTPSDTDSKADAAAATSSFGNNGASASTTPASVSSFAAP
TCDSRQAGLSPPRNSQPELRSQNTDSKTPVEPANPESTNMTSPTSVSFSSADVRLRALFS
EAGSRPTVCPPTTVNAVHDSSSGDMTKRLPAFSASEPPQTSVSTTTSSIRLHHPTNTSST
YPSIHHMDHAPTTTTSSSTSVAHQPHSGSTQNQFSLSSQSTQASKHFEARSRVDAYQHHF
DQQYFGQLAQRQQHQQTSSWICPNCGLPATSCTCNTPSGIANDSDKSASRVSAQHPLSPT
SFGQQSSCSSFALSSGTTQPASPKQERKESRNNAFVGSTNYGSVATSQFYSPEAVSRRQQ
QQQQQQEYLRAAEEVARQSAAAYLHFNKQQLSSSQGNQHSSITPHHSRSDFNITSSAAHQ
QTSSSISGNNTNNSPVFPSIPSAPNPASMVHDYFAQLTGQPGHQSNMFHHNNPAGNSHPV
AAAMQQYLVSNAGGSSLVHSDSSNFYANLPSQRQFESATQSSNYVQGPGATEQQQTRSSM
VGQHLQQQQQPYQFPLMQSSSQMPPFDRLQSHRLLPNFRLP
NT seq
6246 nt
NT seq
+upstream
nt +downstream
nt
atgttgcggtgcgatccatattggtatacgggtgaaaaacctggccgctgcgtgccgagg
acgtcaacagactttcagtgtttgaccatcgatgtcttcggagcattgccgagtggtggg
aacaccggatcagcactgctgaaacttcaagaggaacaagtgcacgcgccgaccatggtg
gacacaaaaatcttcggaaatggaaggggctccaaaaaccaggaatggcgggatgttgcc
tcgtttcatgtgacggacccactgaacgccaaggatgaactcagctcatccagttcaatc
aagctcaatgcctcgcggcataaaaagcggtgcctgtttgtcgtgtcggcttatgcccca
acggactgtagttctgatgcggagaaggatactttctatcgagatctatccgggctcatt
cgacaggcaaaaagcactgacattgtgatccttgcaggcgatttgaatgctcaagtaggt
cgtctgagctccttggaatcacatttgggtggtcgtttcggagtcgatgctcgccgcaca
gacaacggagatcgactccttcagctgtgtgctgatcacgaactgtttctggcaagtacg
aactttcagcatagacgttcgcatctacgaattgaaaggataagcggacttattcataac
gaacctattgagcacaccagcacctccaatattcacctttcccctctgtttgcagatggt
ctcaccaatgcggacagttgtatgccggccgaggttggtgaaaacaatgttcctctcctc
agtcgcgaagtggaagccgatgaaacatcggccaaacgactcaaaacggcggcctccgag
tgtcttactccgctggacgggtcacttgattccagattaagcgaagttgtgatcaagcca
gaggatgaaacgttgtgtcggatgaacgtcacggatgactgtacggttgaagagcttgta
ggagctgaggaatcctcaaccgatgtcagtagtacaaagccatgtgattccacacctcgt
tccgccagtttatcgagttcggcttccgccaatctgtttggatcctggagggctgggcag
tctcgcgatgatgcgattcttcttggtgattcggatgatgaacaagaaaaggtgcatgct
atttcttgctttcactttttgagtttttatagccttgatggtgaagaggagccagaagaa
ccggaggttgaaacggagatatgcgaactgcaagacgccgcaaatctaatggatgaaaga
ggccgggttgtgttaaatcctaaccgggactcggaaacagaatgcgaaatttgtttaccc
ccacaaatcgcccgagtgatcaaaccacatcaggttagcggaatcaggttcctctacgac
aatgtgatagaaaaccaacagcgattcgagactactgatggattcggttgtattctggcc
cacagcatgggtcttggaaaaactatccagattattggatttttggacacaatttttcgt
tactgcaatgtgaaacgagtgttggtcattgtgccgatcaacacaattcaaaactggcaa
gcggagtttgagttgtggttgcccactgatagactcaagcaaagccgtttttggtctaaa
gtggcgtcggattcggttgcagtcacaactgcagacaccaacactgcgatgtcatctggg
gaaattactgaggaatctacatacgaccagcacaccttctctgaattgttttctgagcac
agtggtcaggtagatggcacgactgaaaaaccgatggagcaatcattcggctcgactgaa
accgttcctctttgcaaatctgaggaattcgagaggcaaaatggtatcgagcagcgtggg
aatttacgttcgttcaaactgtttgttgtacgagacgttgtcaaaacgatgacacaacga
caccaaatcgtcaatcaatggtttgaggagggaggagttcttctactaggctatgagatg
tttcgtctgcttctgaatcaaaagcgtggagtgaccaaggcagagattcgtgctttctcg
cggcgtaagaaaaagaccatttgtttagacctgattgaagaggagagacgggaaaagatg
ttagcagattttcacgccgcccttatcgaccccggtccccagctcgtcatctgtgatgaa
ggccatcggattaagaatagtgaagcttctatctccaaagctttgaaggccataaaaaca
cggcgccgtgttgtgcttacgggttaccccctgcaaaacaacctcatggagtactggtgc
atggtagactttgtgcgcccaagctatttggggacgaaacaggaatttaccaacatgttc
caaagaccaattgaaaatggccaatgtattgatagcacaccggaagatcgcaaggtcatg
caaggccgtgcccatgttttacatgaccttttatcgggatttgttcagcgtcggtcccat
gtagtgctgaaagctagtcttcctccaaaaacggaaattgtgcttctcattaaactctct
cctctccaacgtacactctatgcagctttcatgaagagtctcaactccagcgggcctcta
gggtgggcacaagtgaacactctgaagacctatgcgatgtgttgcaagccattgtatagg
cgtatgcaggatgctaagatctgtgcagctcgaattcagttcgccagcattcatgttaat
tccattttgtcagactttgttctgccctttcgtttactcaagatttggaatcatccagat
atactttggcgagcgatggaagaacacaaggaagcaatggacttcgacatcgaagaccct
tccaacagcgcttcatcaacagcttactctaaccgaggtcttacacgcagtgcgaccaca
tctgcactgtccaggcgcacctcctctcagctttctctgtccagttcagaacaatccact
gcaaccgagaaatcacccgccgagactcccccagctagtagcactctcaattggcctcca
tatacaacagcacagcgatcgccgaataccgcgttcactcctcccaatccattcttcccc
actgtaccgcattccttactgaatcggctgacgagccccccgtcagtccccgcatacctg
tacaaccaaactcaacagaacgcccccacagttcctccaccagggacatacgattgggct
tccgatgcagctttatggggtccggactataaacctggaaatgtggaacatagcgggaag
ataatccttttcttgagccttcttgaaggttgtgtgttagctggggacaagattctagtg
ttcactcagagtttatacacactagacctgttagagcgtatccttcgtcgtctcccatta
cctgtccaaaagttttctgaagcggctacttcatcaacttgtgacggccaacctgttgca
ccggggtccgagttcaagtgcacggaagactgtgatacggatgcgaaaatgtacgcagtt
tatgaatgtcggtctataaagacaactgccaccggaccagatgaatccagtgaatcggcc
aacaatgtttcactgcctgagatcgatcatcatggggagcctgtttctacgaaaaatcgt
gatatctgtgaagaacaggcaaacagtcttgatgattcacagtttcttgaaagtgttctg
gggcactccgggtccgtggtctccgatgaaccaacatcttcatgcgtgcccgaagcaact
gagcatcaacagattacaaagagagagccactttcaacgacgtttgagcaggtcaaagag
gaagaacaaccagaggagaccctacggtctctacattatcggctggcttcgcgtctggga
cgttcgaacaagcctagtgtatggaccaaaaatgtgcactatttccgtatgtcggaccgt
gtggttgatgagctgaatccttcacaacagttcactcgctcccaggtcgagttgcttatg
tccttcgaggataaagatatgcaaggtatatcacaggaggatttgcagaactgttccgat
ctcgttgaacctgaccccgtattgtcctcggtattgcagaagcatagatcatggattaca
aagactcctttcacccacgaatctctcctgattgaccggaaggattaccgtctaacgcga
gtagaaaaacgtttggccagacaacgctatgaacaggaaaaacgtttgagtttgagttac
cagaaagcgcatctattccagttccaacagatgcaagcactccagcaccaacaactgctc
gcggccggaatcaacccggcacaattgaaccagtccaatatcctgtcacgtggcagtgga
ttcaattatcgaccaacctacacgagtggtatggctgccattgacgctatgcgccaagtt
gaacgtcagtcacatacaaacacagatcaattacagaacctgtatttcccgtccacagtt
gaaaacaagacagtcgagaggaaaatccccaagggtgaagtgatggaagttatacaaact
tcgaaagggaaatatctgcgaatcgtacgcacaggtgatttgtttgtcgtaaagacgagt
tcacacactcctagcgatacagattctaaagctgacgcagctgcggctactagctctttc
ggtaataatggcgcgtctgcgtcgacgacaccggcctccgtctcttctttcgctgcaccc
acatgtgattcccgtcaagctgggctatcgccgcctcgaaattcacagccagaactgcgc
tcgcaaaacaccgattcgaagacaccggtggagccggccaacccagaaagcacgaatatg
acttctcctacctccgtttccttcagcagtgctgatgtcagactgcgagctttgttcagc
gaagcgggaagtcgacccaccgtttgtcctccgacaacagttaacgcggtacatgatagc
tcatcgggagatatgaccaaacgtttgcctgcattttctgcaagtgaaccgccccagacg
tcagtctctacaaccacctcttcgatccgattgcatcatccgacaaataccagttccact
tatcctagcatccaccacatggaccatgctcctactactactacctctagcagcacttct
gttgctcatcaacctcatagtgggtcaactcaaaatcagttctctctctcctctcaatca
acacaggcctccaaacatttcgaagcccgctctcgggtcgatgcttatcagcaccatttc
gatcagcagtactttgggcagctggcacagcgccaacagcatcaacagacctcttcttgg
atttgtccgaattgcggactcccagccaccagttgcacatgtaacactccatccggaata
gcaaatgattctgacaaatctgcctcgcgagtctctgcacaacatccactctctcccact
tccttcggtcaacaatcgagttgtagttccttcgcgttgtcttctggcacaactcaacct
gcttctccgaaacaagaacgcaaagaatcccgcaacaacgccttcgtcggctccacgaat
tacggttcagtagctacttctcagttctattcacctgaagccgtcagcaggcgacagcag
cagcaacaacaacagcaagaatacttgcgggccgctgaagaagtggctcgccaatcggcc
gctgcctacctgcattttaacaaacagcagctttcttcctcacaaggtaatcaacactcc
tcaataactccacaccactcacgttctgattttaacataaccagttcggctgcgcatcaa
caaacatcctcctcgatcagtggtaacaacactaacaatagtcctgtgttcccctctatc
ccatccgccccgaacccagcttccatggtccatgactatttcgcccagttgacgggtcaa
ccgggccaccagtcaaatatgttccaccacaacaatcctgctggcaactcgcatcccgtc
gctgcggccatgcagcagtatttggttagtaacgcgggtggttcaagtctcgttcattca
gatagttcaaatttctacgcgaatcttccatctcagcgccagttcgaatcggccacgcag
tctagtaactatgtccaaggtcccggggcgactgagcagcagcagactaggtcgtccatg
gttggacagcatcttcaacaacagcagcaaccataccagttccctctcatgcagtcaagc
tctcagatgccaccgttcgacagactacaatcccatcgattgctcccaaactttcgactt
ccataa
DBGET
integrated database retrieval system
