Opisthorchis viverrini (Southeast Asian liver fluke): T265_02200
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Entry
T265_02200 CDS
T04902
Name
(RefSeq) hypothetical protein
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
ovi
Opisthorchis viverrini (Southeast Asian liver fluke)
Brite
KEGG Orthology (KO) [BR:
ovi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ovi03016
]
T265_02200
Enzymes [BR:
ovi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
T265_02200
Transfer RNA biogenesis [BR:
ovi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
T265_02200
Prokaryotic type
T265_02200
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
RVT_1
Motif
Other DBs
NCBI-GeneID:
20316388
NCBI-ProteinID:
XP_009164652
UniProt:
A0A074ZWQ9
LinkDB
All DBs
Position
Unknown
AA seq
627 aa
AA seq
DB search
MRRRLFLICHSLRDLFISMLNKNRVLKRPAPEDESLLGSTKLAAVDGDPPVKKKVHAILM
MYCGWGYYGMQRTPTHPTIEGELSKALFACGYLADFTGEAYRKLPENENVTEKLNSVLPE
HIRILDAIRATRSFSANTACSHRVYDYLLPTYALAPRDFTTDDLVYRSFRVSATTLTHAN
VVLKRFKGTHNFYNFTSGRLPTDSSCNRYIISVECLPPFLYEDCEYCVIRVVGQSFMLHQ
IRKMIGLMIAIVRGNTTEDVFDCVFGTKRVDIPKAPGLGLMLSEVNYDRYNARFGEDGFH
DPIVWSKYEKQMDEFKLNYIYKHIHEKEIEERSMIDWLNSLDVHNYGYRVPSSPIPLKPA
EVNPIPVAPHMPIESLPDKCYPLPLCVALSLKVDHERCNYENQGGFRPDRRYINHICTLK
QIVKLHHCFQRPTLVVSLYLKSALDAVDREELWRFISLMRTLCELLWTRTITRRTFARAA
LSPLVFNFVNDTVYEIPLPASDTSGVEMLPGLPLTDIEYADDIALLDSDPFRIQTILNNL
NNSAVRFDMRFAPAAIRLGGIKPKAHACRRANRCGLSGKLYKFRWTGSNRKCQDSFYQTP
TPMAPTCRQFVRQGRILRCGGAIHTAL
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgcgccgccgcctcttccttatttgtcactctctgcgcgacctattcatttcaatgttg
aacaaaaaccgtgttttgaaacgtcctgctccggaagacgagagcctacttgggtcgacc
aaactggctgcagttgatggagacccccccgttaaaaagaaggtacatgcgatccttatg
atgtactgtggatgggggtactacggtatgcaaaggacccccactcaccctaccatcgaa
ggcgaactttccaaagctctttttgcgtgtggttaccttgcagacttcacaggggaagct
tacaggaagctcccggaaaatgaaaacgtcaccgagaaattgaattctgtcctccccgaa
catatacgtattttagatgccattcgtgcaacacgaagcttctcggcaaacactgcttgt
agtcaccgagtttacgattatttgcttcctacgtatgcgctcgctccgcgggacttcact
accgatgacttggtttatcgatcctttcgggtttccgcaactacactgacgcatgcgaat
gtggtactcaaacgtttcaaaggaactcataatttttacaacttcacttcggggcgactc
cccacagatagtagctgtaacagatacatcatatcagtcgaatgcctaccgccatttctt
tatgaagattgtgaatattgcgttatacgagttgttggacaatcgttcatgcttcatcag
atccgaaaaatgattggcctgatgattgcaatagttcgtggaaatactacggaggatgtg
tttgactgcgtttttggcacgaaacgagtcgatatccccaaggctccaggtctcggtctg
atgctcagcgaagtcaactacgataggtacaatgcaagattcggagaagatggttttcat
gaccccattgtttggtccaaatacgagaaacaaatggatgaattcaaactgaattatatt
tacaaacatatccacgagaaagaaatcgaagaacgatctatgatcgattggctcaattcc
ttggatgtccacaattatggttaccgtgtaccctccagtcctatcccgcttaaacctgct
gaggtgaaccccatcccagttgcgccccatatgcctattgagtccttacctgataagtgt
tatcccctccctctttgtgtagcgctttcattgaaggttgaccatgaacgctgtaactat
gagaatcaaggtgggtttcgccctgaccgcagatacatcaaccatatctgtacattgaaa
caaattgttaaactacaccactgcttccaacgtcccacgttggttgtttctctttatctg
aagtctgctttagacgctgttgatcgtgaagaactttggagatttatatcccttatgcgg
acactatgcgaactcctgtggacgcgtacgattacacggcgaactttcgcccgagctgcc
ctctcacctttggtcttcaactttgttaatgacacggtgtatgaaatccctctgcctgcc
tccgacacctcgggagtcgaaatgcttccgggacttcccctcacagacattgagtatgcg
gacgatattgccctccttgattcagatcctttccgaatacaaaccattttaaataacctg
aataactctgccgtacggtttgacatgcgtttcgcacctgctgctataagattgggtggg
atcaaacccaaagctcatgcctgcagacgggctaatcgatgtggtttatctggcaagctg
tataagttccggtggactggctcgaatcggaaatgtcaggacagcttctaccaaactccc
acacctatggcgccgacgtgtcgtcagtttgtccgtcaagggaggattttgcgatgcggt
ggtgcgatccatactgcgttatga
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