Opisthorchis viverrini (Southeast Asian liver fluke): T265_02371
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Entry
T265_02371 CDS
T04902
Name
(RefSeq) hypothetical protein
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
ovi
Opisthorchis viverrini (Southeast Asian liver fluke)
Pathway
ovi03082
ATP-dependent chromatin remodeling
ovi03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ovi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
T265_02371
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
T265_02371
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ovi01009
]
T265_02371
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ovi03021
]
T265_02371
03036 Chromosome and associated proteins [BR:
ovi03036
]
T265_02371
Protein phosphatases and associated proteins [BR:
ovi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
T265_02371
Transcription machinery [BR:
ovi03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
T265_02371
SWI/SNF complex
T265_02371
Chromosome and associated proteins [BR:
ovi03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
T265_02371
PBAF complex
T265_02371
SWI/SNF complex
T265_02371
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF5
INI1_DNA-bd
CRC_subunit
Motif
Other DBs
NCBI-GeneID:
20316559
NCBI-ProteinID:
XP_009164868
UniProt:
A0A075A6N6
LinkDB
All DBs
Position
Unknown
AA seq
444 aa
AA seq
DB search
MEIAFRYGEKPIEFQLEPDGEYYYLASEVGRYLRLFRKELFKKYPNLWRRLVTPEEKEKL
IQMGLASHVTAMNAMLLRTFEVNDILCGHDDRSMDSMTHLESSARDSQSSSSTSVFGTSS
VGTTASGAAGSKPPGVGVGTGTPSRTGSVSAGINGAPNAGFPVTGSSATDFLSGTPKSKR
ENSGRWVGLGSAPNTSFHLDSVPCPTPISRLRTARQTSKAATFPFCLDDSDPLAFHDNAR
QAECLVPIRLDIECDGVKLRDCFTWNRNEQLITPEQFAEVLCDDLDINPITFVPAIVSAI
KQQVDAHPVEDLLVGQTDTRVIIRLNIHVGNISLVDQFEWDMSERENSPEQFASRLCAEL
GLGGEFVTAVAYSIRGQLAWHQRIYAFSESPLPTVDVAFRNSNEADQWSPVVEVLTDAEM
EKKIRDQDRNTRRMRRLANTQPAW
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggagattgcatttcgttacggggagaaacccattgaatttcagctcgagccagatggc
gaatactattacttagcttccgaggttggtcggtacttacgtttgttccgcaaagaactg
ttcaagaagtaccccaatttgtggcgtcggcttgtcactcccgaagaaaaagagaaactc
attcaaatgggattggcatctcatgtgacggcaatgaacgcgatgttgttgcgcactttt
gaggtcaacgacatactttgcggacacgatgatcgatcaatggactcgatgacccatctg
gaaagttctgctcgagacagccaatcaagcagcagcacaagcgttttcggaaccagtagt
gtgggcacgactgcgtctggtgcagctggatcaaaacctcctggtgttggtgttggtacg
gggacacccagccggacgggttcggtcagtgctggtataaatggggcacccaatgcaggt
ttccctgtaactggatctagtgccacagactttctttcgggcaccccaaaatcgaagcgc
gagaattccggacgatgggttggtttgggatcggctccgaacacctcgtttcatctcgat
tccgtcccttgtccaacacccataagccgcttacgcaccgctcgacagacgagcaaggcc
gctacgtttccattttgtttggatgactccgacccactcgcttttcacgacaatgctcgt
caagcagaatgcctggtcccaattcgtctggatatcgaatgtgatggagtcaagttgagg
gactgcttcacatggaaccgcaacgaacagctcatcactccggaacaatttgccgaagtg
ctgtgtgacgatttggacatcaatccaatcacctttgttcctgcgattgtcagtgcaata
aaacaacaggtggacgcccatccggtggaagacttgctggtcggacagaccgatactcga
gtaatcattcgattgaacattcacgttgggaacatttcccttgtggaccagttcgagtgg
gatatgtcagagcgcgaaaattccccagagcagtttgccagtcgtttatgtgcagaactg
ggccttggtggcgagttcgtcactgccgtggcctacagtatacgtggacagctggcttgg
catcagcgaatctatgcattcagcgaatcgcctctaccgaccgtagatgttgctttccgc
aattccaacgaggctgatcaatggagtccggtagttgaagtattaacggatgcagaaatg
gaaaagaaaatccgcgaccaagacaggaatacgaggcgaatgcgtcgtctggccaacact
caacctgcttggtag
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integrated database retrieval system
