Opisthorchis viverrini (Southeast Asian liver fluke): T265_03039
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Entry
T265_03039 CDS
T04902
Name
(RefSeq) hypothetical protein
KO
K08735
DNA mismatch repair protein MSH2
Organism
ovi
Opisthorchis viverrini (Southeast Asian liver fluke)
Pathway
ovi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ovi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
T265_03039
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ovi03400
]
T265_03039
DNA repair and recombination proteins [BR:
ovi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
T265_03039
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
Tlp
Motif
Other DBs
NCBI-GeneID:
20317226
NCBI-ProteinID:
XP_009165692
UniProt:
A0A074ZT15
LinkDB
All DBs
Position
Unknown
AA seq
1042 aa
AA seq
DB search
MLVAREYFNNVSLVKHYHTAGHASLAYITIKKSNTDFLRHFLLKRQYRVEIYTAATKSGR
DNEWTLKLTASPGNLQQLEDILLESQSAVEFTGITSIFLKWTDDQLVVSLAFCDKESRRF
VVGEFVDSIHLANLETALVQLESRECLIPVGLLGASNGASKTKGMDPTVTEHLNMIFQRA
GFLATEVEKNNFALQDVTQDLNYLLRRPKGIQTTGISQDNKALEHKQGLACLGAIIKYLD
LKADDSNAGVFSLEPFSLDNFVRLDSAATRALHLLPGPDDKNRYQSVYGVLNNCRTQQGQ
RLLAQWLRQPLTDVNKINERLDMVEAMVEETGVRQSLHDDFLRRMPDFQRIGRKLQRKQG
CGLQASRLKPTLCQGVDNAPNSSCDGQTVDDLFWWVFSPDEGNIFSVHLEIHIPGTLLAF
SSELFLVDMKRRQLNMLHQVASCFSRYDIRDIRSIDVYRIYQAIARLQNAISLLRQCGGQ
TSLAVQNYLIEPLQVSAFLPSPLRISGFQQLTNVDCVVYDCGLFGVVTMLVLLEHKPAAG
ISQSTVPLNLWGLHLSSPDFGNVLCEFQVAVENFSKFQEMVQSTIDLEMIQRRNEYIIRS
DFDDELGELKSKLDKLEESIEDEFRGFTPYTGLLETLLTTFIPNSVICVQSARKLNLEPG
KSVKLDSNEQLGYFMRVTLKEEKTLREFKSFEVLDAQKGGVRFRNSTMSQLNSSHLEMKQ
EYAAAQQTIVDEVIRITGKQIFLVITGPNMGGKSTYIRSVGVITAMAQIGSFVPCSFAEL
FPVDAVMARVGAADCQIRGVSTFMAEMLETSSVLRAATPNSLVIIDELGRGTSTFDGFGL
AWAVASHLAGPQLGCLSLFATHFHELTILAHHMPGRVSNLRVTAHVSPGGSADSINGSGV
VMLYKVEPGICTRSYGLDVAKLVGLPDKVLTEAEHKAARDEQLESLWLTLDGKYRMDSDG
DPASKRIRWDSDVSEAHASAAVVIADQLRGQLLRILDDATGNGQNATPDDVNKFGAHLAQ
ITKALLNNSDSNLPQELLLLAK
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atgttggtggctcgagagtatttcaacaatgtatctcttgtcaaacactatcatacagca
ggacacgctagcttagcatacataaccattaaaaagtcaaatactgactttctgcgtcac
tttctactgaaaagacaatatcgagtggaaatttacacagcagccaccaaatctggccgg
gataacgaatggacattgaaactgacggcatccccgggaaatctgcaacagttagaagac
attctactggaaagtcaatcggctgtggaattcacagggataacttcgatctttctgaag
tggactgatgaccagctggttgtctctttggccttctgtgacaaagagagcagacgtttt
gttgttggtgaattcgtcgattctatccatctggctaacctagagactgctctcgtccag
ttggaatctcgtgaatgccttattccagttggtttgttgggtgcatccaatggtgcttcc
aagacaaaaggcatggatcccactgtgacagaacatctaaacatgattttccaacgagcc
ggcttccttgccacggaagtggaaaagaataatttcgctcttcaagatgtgacgcaggac
ttaaactacttgcttcggcgtcccaagggtatccagactacaggaatcagtcaagacaac
aaagctttggagcacaagcaagggttggcctgccttggagccatcatcaaatacttagat
cttaaagcggatgactccaatgccggggttttctccttggagcctttcagtctggacaat
ttcgttcgattggatagtgccgcgacccgtgcgttgcatttactccctggccccgatgat
aagaatcgttaccaaagtgtttacggtgtgctgaataactgccgaacacagcaaggacaa
cgtctacttgcacaatggttacgacaaccgcttactgacgtcaataaaatcaatgaacgt
ttagatatggtcgaggcgatggttgaagagactggagttcgccagtccttacacgatgac
tttttgcgccggatgcctgactttcaacgaattggtcggaaacttcagcgtaaacaaggg
tgcgggctacaggcaagtcgtttaaagccaactctttgtcaaggtgtggataacgctccg
aacagtagctgcgatggacaaaccgtagatgatctgttctggtgggtgttctctccagat
gagggaaacattttcagtgttcatcttgaaattcatattcccggcacgctgttggcgttt
tcgtctgagctcttcctcgtggatatgaaacgtaggcaactgaatatgctgcaccaggtc
gcctcctgtttcagtcgctacgatattcgagatatcagaagcattgatgtgtatcgaatc
taccaagctattgctcgcctacagaacgctatcagtttgctccgtcagtgtggtggtcag
acttcgttagctgtccagaactacttgatagaaccgcttcaggtgagtgctttccttccg
agcccattgcgtatcagtggtttccaacagttaactaatgtcgattgcgtggtctatgac
tgtgggttattcggtgtggtcacaatgttggttctgctggagcacaagccggctgcggga
atatcacagtccactgtgcctcttaatctttggggactacatctgtcctcccctgacttt
ggaaatgtcttgtgtgaattccaggttgctgtggagaatttctccaagttccaagaaatg
gttcagtcaacaattgatctggaaatgatacaacgacgtaatgaatacattattcggtct
gattttgatgatgagcttggagagctgaagtccaagttggacaagcttgaagaatcgatt
gaagatgagtttagaggatttacaccttatacaggtctgcttgagactcttctcactaca
ttcatccctaactctgtcatctgtgtgcagtcggctcgtaaactgaacttggaacctggc
aagtccgtcaaactggatagcaacgaacagctgggttatttcatgcgtgtcactctcaaa
gaagaaaaaacgctcagggagttcaaatcatttgaagttctcgatgcgcaaaaaggtggt
gttcgttttcgcaactccaccatgtctcagctgaactctagccacctcgaaatgaagcag
gagtatgcggctgctcagcagaccattgtggatgaggtgatacgaatcacaggtaaacag
attttcttggtaattacgggtccgaacatgggtggaaaatccacttacatccgaagcgtc
ggtgttatcactgcgatggctcaaattggcagttttgtgccctgttcgtttgctgaacta
tttcctgtggatgcagtgatggcacgcgttggggcagccgattgtcagattcgaggggtg
tcaacgtttatggcggagatgctggaaacttcttcagtcttacgagcagccaccccgaat
tccttggttataatcgacgaactgggccgcggaacgtctacctttgatggcttcggtctg
gcttgggctgtagcttcgcatctagcaggaccacagctgggttgtttgagtttgtttgcc
acgcatttccacgagttgaccattctggctcatcatatgcccggtcgtgtatccaacctg
cgtgtcaccgctcacgtgtctccaggaggcagcgctgactccataaacggttcaggtgtt
gtaatgctgtacaaggttgaaccaggtatttgcactcgtagctatggcttagatgttgca
aagcttgttggcctccctgacaaagtgcttaccgaagccgaacacaaagctgcccgtgac
gagcagttggaatctttgtggctaactttggacgggaaataccgcatggacagtgatggc
gatcctgcctccaaacgtatacgttgggacagcgatgtatctgaggctcatgcatcagcg
gctgttgtaattgccgaccagttacgcgggcaactcctacgcattttggacgatgctact
ggcaatgggcagaatgcaacacctgatgatgtcaataagttcggggctcatttggcccag
ataacaaaggctcttctcaacaactccgactccaatctacctcaagaattattattgctc
gccaaatga
DBGET
integrated database retrieval system
