Opisthorchis viverrini (Southeast Asian liver fluke): T265_03684
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Entry
T265_03684 CDS
T04902
Name
(RefSeq) hypothetical protein
KO
K14409
protein SMG7
Organism
ovi
Opisthorchis viverrini (Southeast Asian liver fluke)
Pathway
ovi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ovi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
T265_03684
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ovi03019
]
T265_03684
Messenger RNA biogenesis [BR:
ovi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
T265_03684
mRNA cycle factors
Common to processing body (P body) and stress granule
T265_03684
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
Forkhead
Motif
Other DBs
NCBI-GeneID:
20317871
NCBI-ProteinID:
XP_009166490
UniProt:
A0A074ZRQ8
LinkDB
All DBs
Position
Unknown
AA seq
1235 aa
AA seq
DB search
MEHKLLQELRCMLQRKPSSTAPPSAVDEFHLRLQEIFGEIITRYPGYAVGQKLELEMWNT
LYKNQIDALQHALGRRSTGNPGTNAQGQPRSSMELKLRFVLLLDRASGVYLTLVQRLLHS
LPGLSWPKSILSATTSLAAPAGLFSYGQLGRTCGRFDLDLATFSALHRISATVYSNSRWL
ERRTEVDSATPSNPAPRILSRGDRLPAVQSHPQQGTTDAVEESPPSFSVDGFPPRPSEES
QPTELDSPVSTIDHSIAVNYLVQHCLVHLGDIARYRQQLNVAAGYYIWGWIVHPDSGHPF
NQLAILESSKGAKKRSDTLFYYYVRAIACEYPFPAASTNLTSMLRGALSCSNHTKLSESL
DDNSTSVVQWKKDPRQLLFYFFAALQLCSDASRLVSLANEFSNAINCSYQDSWTASDSQS
LMRLVTLHIYLLMEHSMDSKSTAKSEIGRTLLLHCTVRLCDWIARQYVAHNQEPKQCQSS
IRHNLLASLSLIFLWLRQQACTHPVSLDAAFRIYAPPLSEEFITFLNDLLSNGPPDESDI
HSPSCSVDELDNVLDWKRLIRLPEICLLQGFKPLQIPTQQRLCETESQAPLFPFNMDWLH
ARNSVKPLQTDADQPNANVLHYFRLTSSQQIIHERIEFILKSARIIAREYPALLGWIDGD
SGPLNSSFPNGLFRTVARKPPVLAELIIPSHVSQQPSSDDTPLDENNLTIMHRTEANSST
GNQTLFNHHAVPLQIEIQPNDNTTNTSDQRVLTEQSLPVQRSTNAASDASSEPTAHVDQI
AGERNLHSGMAITPRSPNEPVEWRATPANSIEQISSRTADAARSTSTTTTSGSASGGLIV
NAELAKFIQEQASQVAARQQRAELSSLSPNINGDHPDAANRAPSTNNDGSTVHRTGKANQ
TRLCLSAAFRRDLPPRFARRLQAELLEREAQEQRLGTNVESSDKLNSLTSSVAMLNLDQP
APLARKESEAPFELNSLLSTTGDPVASDELITISPAVNSIEAGIFSSGSLQPAHVLHARQ
LTTSSTPFLTPVQNASLDVSPRSYVAPPLSMYPTPPMPLPFSRSHMIPDFQTAPPTAPPA
PPVFGSQIPPRSSLYDWHPPNRVFDPVNTAPVSFALPYTSTVIPAQPVHSTMSNPLLPIS
DHLPPLDLDNIGEGVGFPGQYRLRSLGQSAEYNSATVNTDAARFVQHSLLLNSSATSTKG
FAYPTEGLLESSVLHPAAVVTSTEQEQCLNFPPVP
NT seq
3708 nt
NT seq
+upstream
nt +downstream
nt
atggaacacaaattactacaggagcttcgttgtatgttgcaacgcaagccatccagtacc
gctcctccttcggccgtcgatgagtttcacttgagactccaggagattttcggtgagata
ataacaaggtatcctgggtatgcggtcggtcagaaactggaactggagatgtggaatact
ctatacaagaaccagattgacgcgttacaacacgctttgggccggcgatcaactggaaat
cctgggacgaacgctcaaggacaacctcgttcatcgatggaattgaaactgcgcttcgtc
ctgttactcgatcgagcatctggtgtctacctcacattggttcaacgtcttttacactcc
cttcctggtctctcctggccaaaatcgatcctaagtgccaccacgtcacttgcagcgccc
gcaggcctattcagctacggtcaacttggacgaacttgcggtaggttcgacttggatttg
gccactttcagcgcgctgcatcgcatctcagccacagtgtacagtaattcacgttggttg
gaaaggcgcaccgaagtggattctgccaccccgtccaatcccgcaccgcgtatcctatct
cgtggagatcgtttaccagccgttcagtctcatccacaacagggcacgaccgatgctgtt
gaagaatctccgccttcattcagtgtggatggtttcccgcctcgaccatccgaagagtca
cagcctactgagctggactcacctgtttccactatagatcattcgattgcagtgaattat
ctcgtgcaacactgtcttgttcacttgggtgatattgccagataccgacaacagttgaat
gtcgccgccggttattatatttggggatggattgtccatcctgactctggtcaccctttc
aatcagttggcaattctcgaatcatctaagggagcgaagaaacgatcagatactctgttt
tactactacgttcgtgccatagcctgtgagtatcctttcccggcagcatccactaatctg
acgagtatgttacgtggcgcgttatcttgttcgaatcacacaaagctctccgaatctttg
gacgacaattcgacatcagtggttcagtggaagaaggacccacgtcaacttttgttctat
ttcttcgcggctctccaactttgttcagatgcatctaggttggtttctcttgcaaacgaa
ttttcgaacgccatcaattgttcttatcaagacagctggactgcttcagacagccaatcg
ctgatgcgattagttactctgcatatctatcttctgatggaacattccatggattcaaag
tcgacagccaaatcggagattggccgaacgttgttgcttcactgtacggtccgtttgtgt
gactggatagcgcgtcagtacgtcgcccataatcaagagcccaaacaatgccagagttcc
atccgacacaatctactggcaagccttagtctaatatttctgtggctgcgacagcaagcc
tgcacacacccagtttccttagacgccgcattccggatctacgctccacccctctcggaa
gaattcattaccttccttaacgatcttttgtcaaatggcccgccagacgaatccgacatc
cattcgccatcatgctctgtcgacgagttggacaatgtattggactggaagcgattgatc
cgtctaccggaaatttgcttgcttcaggggttcaaaccactccaaattccaacgcagcag
cgcttatgcgaaacggagtcgcaggcgccgttattcccattcaatatggattggttacat
gcacgaaattcggtgaaaccgcttcaaacggatgctgatcaaccgaatgctaacgtgctt
cattatttccgtctgacatcctctcaacaaatcatccacgagcggattgaattcatccta
aagtcggctcgaatcattgcccgtgagtatccagctttacttggctggattgatggcgat
tccgggccgctgaattcatctttccccaacggtctattccgtaccgttgctagaaagcca
cctgttctcgctgaactgataattccttcgcacgtcagtcagcaaccgtcctctgatgac
acaccgctggatgagaacaacttgactatcatgcaccgaactgaggctaatagctcaacg
ggaaatcagactctgttcaaccaccatgcggtgcctctacaaatagagattcagccgaat
gataatacaaccaacacatcagaccaacgtgtgctcacggaacaatcacttcccgtccaa
cgttctaccaacgctgcttccgatgcttcatctgaaccaacggcgcatgtggaccaaatc
gctggtgaacgaaatctgcactcaggaatggcaatcacaccacgttcaccaaatgagcca
gtagagtggagggctacgcccgcgaattcaattgaacaaatctccagtaggacagcagat
gctgcgcgttctacttcgacaacgacaacctctggatctgcatccggtggtttgattgtg
aacgcggaactggcgaaattcattcaagaacaggctagtcaggtcgcagccagacagcaa
cgtgccgaactgtcctcgttaagtccgaacatcaacggtgatcatcccgatgcagcaaac
agggccccgtccaccaataatgatggttcaactgttcacaggaccggtaaggcgaaccag
actcgcctttgcttgagcgctgcgtttcgtcgcgaccttcctccgcgttttgctcgacga
ttacaagcggagctactcgaacgcgaagcacaggaacagagacttggcacaaatgttgag
tcgagtgataagctaaattcgctcacttcgagcgtagccatgctgaatctcgaccagcct
gctccattggctcgtaaagaatccgaagcaccgtttgaacttaattcattgttatctaca
acaggtgatccggttgcgtccgatgaactgatcaccatatccccagctgttaactccatt
gaggctggtatcttctcttctggctcacttcagcccgcacacgtactccatgctcgacag
ctcaccaccagttcgactccatttcttactccagtccaaaacgcgtcattggatgtgagc
ccaagatcgtacgtcgcacctccactttctatgtaccccacgcctccgatgcctttaccc
ttctcccggtcacacatgattccagatttccaaacggcaccgcccacagcgccaccagca
cctccagtgttcggttctcaaatcccaccgcgatcctcactgtatgactggcatccacct
aatcgggtgtttgatccggtaaacacagctccggtgtccttcgcattaccctacacctcc
actgtgattcctgcacagccggtccactcaaccatgtcaaatccattgctcccgatttca
gaccatcttcctccgctagaccttgacaacatcggtgaaggtgttggtttcccaggacag
taccgcttgaggtcgctaggacaatcagcagaatacaactccgccactgtgaatacggat
gccgcaagatttgtccagcactcactgctgctgaacagttctgcaacgtccacaaaaggc
ttcgcctatccaacggaaggactactggagtctagtgtactccatccggcggcggtggtt
acctccaccgagcaagaacagtgtctcaatttcccgccggtgccctga
DBGET
integrated database retrieval system
