Opisthorchis viverrini (Southeast Asian liver fluke): T265_03790
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Entry
T265_03790 CDS
T04902
Name
(RefSeq) hypothetical protein
KO
K04681
retinoblastoma-like protein 1
Organism
ovi
Opisthorchis viverrini (Southeast Asian liver fluke)
Pathway
ovi04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ovi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
T265_03790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ovi03000
]
T265_03790
Transcription factors [BR:
ovi03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
T265_03790
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RB_A
RB_B
DUF3452
Motif
Other DBs
NCBI-GeneID:
20317977
NCBI-ProteinID:
XP_009166625
UniProt:
A0A075A225
LinkDB
All DBs
Position
Unknown
AA seq
1181 aa
AA seq
DB search
MPPEGDMRAGILPGCPSLHRSREVEVGFESQSFWSRVQWLRHRFMYWKVRCSNPTSASRL
LLSRLRQLGSILSIMSPSISMAARPRMGATAERSTDLMDFDYEEPIEKRFEDLCQDLCIE
GAIREEAWEKYKDVWANYSIDGDQIQWLVCSLYECCRRSVADSISGHVVENAYVSLSRLL
SAAKMSMVQFFHRIKKWADMTDMVDDMRDRVELLERQFAVSSVIFRNFGRSFGVLFRETS
YIQNQMHPTGTDLFRLTWLLFIKSRTSFPAVTDDLVNSYHLLVCCLDWVLGAVMVSGRHD
LINVEMNGLPKDFLNAIGQNKPWCPPGDEPPCMLRPICEDNEVNYVECKTVKEHFFRSFI
LRLIEKETIKLEPMVYGSLLESGNFDITLQNLNNSYEEYIIGTGDFDERIYLSPSAAEEI
GSAGDSGIHSNLNLPSDLAPSARRYMLEVSTSGFGGFTETTRRGNANAGAVSRLNGGVNF
NNPEARNQNLSQLQILLSGRSKEPSEALVDLVESHCTMSLLADMRMTLDGLMNEFQLAYA
GSPDAKPVVSSDSADSNVLAISAAQQRLHLGCILYYLVLENILVDEIRKIEKRLTSSTSV
MDDAALARRMKPNLTTLLSQELFHRSLFACCMELVLISSDAPEHHFPWILEALSLDSLNF
FKVIEVVVRSIDFPRDMVKYMNQVAELILDSYAWRASSPLWSMLKASGRAPSIEEVIPPE
KLERSSGNEFPRTESFVSDSRKSSIMPLSGLVLKPGPSPLKQPRLIPSSNTGGLFRTRSV
DSGLLPKHQLIGPSEDESAQAAAQLLASGEELDAPTDTNLASVHTEEINLTGPEPITSVA
GNKETLESGPSESVADSEQSLWSAASNAILSYYPTRHDSLAIFFRHFYRVASARLRDLCE
RLNLQRDILVKIWTGFELCVVHEVELLRDRCLDQILLCSLFGVCKLVLYRPLSFIDIVQV
YRMQPQSNRDIYRRVLLNRVTYGHSSGEERGDITRFYNTVFLMRMKDFLQKAASATSADR
TSTADVTPWPNAGRWMGPPSLAPLPIQKSNAIPAGTGFGSTASAGPIDITQARRLASNRN
VFISPVKHQVNLSPKRVVFTVGRSTGKDLQDVNVMISSAERRASMANLTMGLKRPGSGAT
VSYVGPVSGTLAVTPASGGAPRTVTLVGPGNFAAKRLELDL
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atgccacccgaaggagacatgagggctgggatactgccaggttgcccaagcctacacaga
agtcgagaggtagaggtcgggttcgaatcacagagtttctggtcaagagttcagtggtta
aggcacaggtttatgtactggaaggtccgttgttctaacccaacatcagcatcccgattg
ctcctgtctaggcttaggcaacttggcagtatcctatccatcatgtccccctctattagc
atggcagctaggccccgaatgggtgccacagctgaacgatcaactgacctaatggatttc
gattacgaagaacctattgagaagcgctttgaggatctttgccaagacctttgcattgaa
ggagctattcgcgaagaagcttgggagaaatacaaggacgtttgggctaattactctatc
gatggtgatcagattcagtggctagtgtgttctctgtacgagtgctgtcggcgttcggtt
gctgatagcatctctggacatgtggtggaaaacgcttatgtttcactctcccgcctcttg
tcagcagcaaagatgagcatggttcagtttttccaccgtatcaaaaaatgggccgatatg
actgacatggtggatgatatgcgggaccgcgtggagttgcttgagagacagtttgcagtg
tcatctgtaatctttcgcaactttggccgttcttttggggtcttatttcgagaaaccagt
tatattcaaaaccaaatgcatcccacgggtacagatctcttccggctcacttggctcctg
ttcatcaagtcacgtaccagcttcccagcggtgactgatgatctggttaattcctatcat
ctactagtgtgctgtttggactgggtgctgggtgctgtaatggtctcaggacgtcacgat
ctaatcaacgtggaaatgaatggtctacccaaagacttcttgaacgccatcggtcaaaac
aagccctggtgtccaccaggtgatgagcccccatgcatgttacgccctatttgtgaagac
aatgaggtcaactatgttgagtgcaaaactgtcaaggaacacttcttccgttccttcata
ttgcggttaattgaaaaggagaccatcaaactggaaccaatggtgtatggaagtttgtta
gagtcgggcaatttcgacatcacgctgcagaatctaaacaacagttatgaagaatatatc
attggcactggtgattttgatgaacgcatttatctgagtccgagtgctgcagaggagata
ggttctgccggggatagtggtattcattcaaacctcaatcttcccagtgatctggctcct
tccgcgcgacgttacatgctcgaggtgagcacctcgggattcggtggtttcacggagacg
acacgacgtggaaatgctaatgctggagctgtgagtcgactaaatggaggcgtgaacttc
aacaatccggaggccagaaaccaaaatctcagtcaattgcagatcttactcagtggacga
tcaaaagaaccaagcgaagctcttgtggacctcgtggaatctcactgtactatgtcgttg
ttagcggatatgcgtatgactctagatgggctcatgaatgaatttcaactggcttatgcg
ggatcacccgatgcgaaaccggttgtttccagtgattcagcagactccaacgtgcttgcg
atatcggcggcgcagcaaagactacatttaggctgtatactgtattatcttgtgctggaa
aatatcctcgtcgatgaaatacgtaagattgagaagcgtttgacgtcatccacgagcgtc
atggatgatgcggcactcgccaggcgtatgaagcccaacctgaccactttgttgtcacag
gagttgtttcacagatctctgttcgcgtgctgtatggaattggtactgatcagctctgat
gcaccagaacatcattttccttggatattggaagcactcagtctggattcgctgaatttt
ttcaaggtcattgaggtcgtcgtacggagcattgacttccctcgggatatggttaaatac
atgaaccaagtggccgaattaatcttggattcttatgcttggcgggccagttcaccattg
tggtccatgttgaaggcttctggtcgggctccgtcaattgaagaggtcatacccccagaa
aagctggaacgttcatccggaaacgaattccctcgcactgaaagcttcgtctccgattcc
agaaagtcttctatcatgccgctgtctggattggtgctaaaacctggtcccagtcctttg
aaacaaccacgtctgattccgtcgtccaacacaggtggtctctttcgcactcgaagtgtg
gattccggactcttacccaaacatcagctgataggtccgagcgaagatgaatctgctcaa
gcggctgctcaactacttgctagtggagaagagttggacgcacccacggacaccaatttg
gcgagcgttcatactgaggaaatcaatttgacgggaccggaacccatcacttcggttgcc
gggaataaggaaactctggagtcgggacccagtgaaagtgttgcggatagtgagcaaagt
ctttggtccgctgcaagcaatgctatcttgagctattacccaacacgtcacgattcactt
gctatattcttccgtcacttctatcgagttgcgagcgcacgtttgcgagacctttgtgaa
cgtctgaatttgcaacgtgacattttggtcaaaatctggactggtttcgaactgtgcgtg
gttcatgaagtggaactactacgcgacagatgtttagaccaaattctgctctgttccttg
tttggtgtttgtaagctggtgctctatcgtccgctttcgttcattgacatcgtacaggta
taccgtatgcagccccagtcaaatcgtgacatctatagacgtgttcttctcaaccgcgtc
acttacggacacagtagtggtgaagaacgaggagatatcacacgcttctacaataccgtt
ttcttgatgcgaatgaaggattttctacagaaagctgcgtctgctacttctgccgatcgc
acctccacagctgatgtgacaccatggccaaacgctggacgctggatgggtccaccctcg
ttggccccactgccaatccagaagagtaatgcgattccagctggtacaggattcggtagt
acggcatccgcaggtccgattgatattacgcaagccagaagacttgccagcaatcggaac
gtattcattagtcccgtcaaacatcaagtcaacctctcccctaaacgtgtggttttcacc
gtcggtcgaagcacaggtaaagatctgcaggacgtcaatgttatgataagctcagcagaa
cggagagcgtcaatggccaaccttaccatgggactcaaacgaccaggcagtggtgcgaca
gtctcatatgttgggccggtgtcaggcacacttgctgtcacccccgcctccggtggtgct
ccgcgcaccgtcacattggtcggacccggaaactttgccgccaaacggcttgaacttgac
ctttga
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