KEGG   Opisthorchis viverrini (Southeast Asian liver fluke): T265_04375
Entry
T265_04375        CDS       T04902                                 
Name
(RefSeq) hypothetical protein
  KO
K12616  enhancer of mRNA-decapping protein 4
Organism
ovi  Opisthorchis viverrini (Southeast Asian liver fluke)
Pathway
ovi03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ovi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    T265_04375
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ovi03019]
    T265_04375
Messenger RNA biogenesis [BR:ovi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     T265_04375
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     T265_04375
SSDB
Motif
Pfam: Ge1_WD40 WD40 WD40_WDHD1_1st Beta-prop_Vps41 Zn_ribbon_FGT1_2 DUF445
Other DBs
NCBI-GeneID: 20318557
NCBI-ProteinID: XP_009167360
UniProt: A0A074ZSV0
LinkDB
Position
Unknown
AA seq 1357 aa
MIRLRNTDTSRKLLLREFHGKVVTMDFADKEEPVLAVLDRSCTLHVFTILPSSTSEDSYV
AHTLLVLQSSNSQPETDSQSLCWCPWKSGSSMKLSTLDQGVLKLGLPTHPSMLLSISCGG
KVEVMNVAAVSSLLNSRFSSHSTTEFPEPANSWNRDQLSQAIADNSAADFIYAKTGDHGN
TVTALSLSRDGSCAASACLDGQVRIFTLLRDKGYGEDGNLSPVHTFSPHAGLPLHGLIFV
DDDTIDGFNGTWRHLITGAQYNRELRLWSCSDWSCLQTLRFCVAERTSQAISDTSEAQFS
SSVPSARPSIIMGLDCSGSLLVAADITRRVLYILALTKQSTSEPNAEGDSSDSQTLMFTS
ISEFLLTTPCILFALGPCDRRKLPLSECPSTVDESNQVVDLINLEIHSIHTWHLLNGTIT
FELPHWTKPDAEANNVQTVEDSVKSSQVDPSEPVSEPVRFTIGGSYETFQNPDQLLPTSV
AEETHFPETVGEMGEDIVHQAPEDDNEDLHPLRPSDFSSESLPAPPSADGGEDDDGDRLP
TVDLDFPLDLTPSTFHTPKYLPEGMESAEHNDDSSTVAQSEDKSVTKTAHPIVPFEAIED
AMRASERNPSGKGSPSPDACQLEELRNDLDLLNNLLSPGNDETTLRDGDDVHNNPHEGPS
SDVDVNISSASAPDLQELVDSSADASRSPLENLKGSIATRLLKEEGDKSRVAQQVEGPIN
VGRRGSLSLHPETNWSTMSLYSSPSSSSSSTADTPVGSDDVIQAPDSNDVPLDLPAFDAD
RPALDGGSGRMDGVVNLLRFLVADSNKRSHQMEVVLDKLKQTQDQLDRISQAQMELSKRL
QTSTTNGTQPPGSAHYYASKTSSASDGEYCYPSSPMMQTNHLTATVQQSTVQQAGTDEGK
LPEWTKQILLQLRTQQGDYARRFSHLESMMNKVSTSTNELKKNQAKPAIQQSSTEPRLDQ
LPKMTCDLLKPIVRSEVQNAIVNNTQKLIDPLQKAIFRAIQESLNGLPSTVSESLSRLMR
DKSFSNQFSRLLSSTLSADLTGAYRDSLLRVFIPALEKNIQRLFQELDVVFRAGTQQYLK
EVQKLSQAQSDPSTLANTICAELAPELKNVLSSTLSTRVDEPGAFKTDPRTMGTLRDNGS
LPAFGTQDVSSKPTPYKNKSPIRRPPPTEDDHAVLAAPPAVPSRGIPSTKSLWTVDRGAG
ENQIGAPAAQASGSSVAPKPTTTLTKKEEFARLLGSCFHQSGACFGRLQRHRPRSTLLIR
QIHYSTEHLTLLNSPAELRRFGCPVGFEVKIPRRGCRLSKQTRPNYYTTRTKNNKSSKPP
FRHFLEQCHGRRNIQAVSFSPQPHCQTKSFRHIIVRN
NT seq 4074 nt   +upstreamnt  +downstreamnt
atgatacggctgaggaacacggatacctccaggaagcttcttttgagggaatttcatggg
aaggtagtgacgatggacttcgcggacaaagaggagcctgtactcgcagttctggacagg
tcgtgcacactgcatgttttcacgatcttaccatcgagcacaagtgaagattcatacgta
gctcatacactgcttgttctacagtccagtaactctcaaccagaaactgatagtcaatct
ctatgttggtgcccttggaagtctggaagctccatgaagctatctactttagatcaagga
gttttgaaacttggtctcccaacccatccgtccatgttgctgtccatttcatgcggagga
aaggtggaggttatgaacgtagcagccgtgtccagcttgctcaactcccggttttcatct
cattccacgacggaatttccggagcctgccaacagttggaatcgtgatcagttatctcag
gctattgcggataattccgcggcagattttatctatgccaaaacaggagaccatggaaat
acagttaccgccttatcattgagccgtgatggatcatgcgcagcctccgcttgtcttgat
ggtcaggtgcgaattttcaccttactgcgggataaaggatacggggaagatggtaatttg
agtccggtacacactttctcgccacatgctgggcttccactgcacggcttaatttttgtc
gatgatgacactatagacggtttcaatggtacttggagacatttgattacaggagcccaa
tacaatcgcgaactgcgtctttggtcttgttcggattggtcttgtttacaaaccctgcga
ttttgcgttgccgagaggaccagtcaggcgatatcagacacttccgaagcacaatttagc
tcgtcagtacccagtgcaagacctagtattatcatgggactcgactgctccggttcttta
ttggtggcagccgatattacacgtcgtgttctgtacatccttgccttgaccaaacagtcc
acgagtgaaccaaacgctgagggagattcatcggattcacaaacattgatgtttacgtcc
atcagcgaatttttactgaccacaccatgtatcttgtttgcactaggcccttgcgacaga
cggaagcttcctctgtcagaatgcccatctactgtggatgaatcgaatcaggttgtggat
ctcatcaacctggagattcacagcatccatacttggcacttgctgaacggaactataacg
tttgaactaccgcattggaccaagccagacgctgaagcgaacaatgtacaaaccgttgag
gactccgtcaagtcttcgcaagtggatcccagtgaaccagtatcggaacctgtgcgcttt
accattggtggttcctacgaaacttttcagaacccggatcagcttctgcccacctctgtt
gccgaagaaacacactttcccgaaaccgttggagaaatgggagaagatatcgtacaccaa
gctccggaagatgacaatgaagaccttcaccctctccgcccttcggatttctcttcagaa
tcgctacctgctcctccttctgccgatggcggtgaggatgatgacggcgatcgtttgcct
actgttgaccttgattttccgctcgacctaactccaagtacattccacacgcccaaatac
ttacctgagggcatggaatctgctgagcacaacgatgattcctcaactgttgcccaatcc
gaggataaatctgtgacaaagaccgcacatccaatcgtcccttttgaagccatcgaggat
gccatgcgcgcaagcgagcgcaacccaagtggcaagggttctcccagtcctgatgcatgc
caattggaagagcttcgcaacgatcttgacctgttgaacaatttgctgtccccaggaaac
gacgaaaccactctacgagacggggatgatgtacataataatccacacgaagggccatcc
tctgacgttgatgttaacatttctagtgcgtctgctccagacttacaagaactcgtcgat
tcatctgccgatgcatctcggtcgcctctcgagaatcttaaaggatccattgctacccgc
ctcctcaaggaggaaggagataaatcgcgtgtagcgcagcaagtcgaaggacctataaac
gtcggacgccgcggttcactaagtctccatcctgaaaccaactggtccacgatgtcatta
tactcctcgccgagttcttcatcttcttcgactgcggacacccccgtaggttcggatgac
gtcattcaagctccagacagtaatgatgtacctttggatttgcccgcgtttgatgcagat
cgtccagcgttggatggtggttcaggacgaatggacggtgttgtgaatcttttgaggttt
ttggttgctgattccaacaaacgatctcatcagatggaagtggttctagataagctgaag
caaacccaggaccaactggaccgcatttcgcaggcgcagatggaattgtccaagcgcctc
cagacgtcaaccactaatggcacgcaacctccgggatcggcgcactattatgcatcaaaa
acgtccagtgcatcagatggggaatattgctacccgagtagtccaatgatgcagactaac
cacttgacggccacggtgcagcagtcgactgttcaacaagccggtacagatgagggcaaa
ctgcccgaatggaccaaacaaattctcttgcaattacgtactcaacagggtgactacgcc
cggcggttctcacacctcgagagcatgatgaacaaggtttcgacaagcacgaacgaatta
aaaaagaaccaagccaaaccagccatccagcaatcgtcaactgaacctcgtttggatcag
ttgcccaaaatgacttgtgatttgcttaaaccgatcgttcgatcggaagtgcagaacgct
atcgttaataatacccagaagctcatcgatcccctacaaaaggcaatattccgtgccata
caagagagtttaaacggccttccttcaactgtatcagaaagcctctcacgtttgatgcgc
gataagagcttcagcaatcagttctctcgccttctatcctctaccctgtccgctgacctc
actggggcgtatcgtgattctttgctacgagttttcattcctgcactggagaaaaatata
cagcgactgtttcaggaacttgatgttgtcttcagagctggcacacagcaatatttgaag
gaagttcaaaagctctcacaagctcaatctgacccgagcactttggccaacacaatctgt
gctgaactagctccggaattaaagaatgttctcagttcaaccttgtcaacgcgcgtcgat
gagcctggcgccttcaaaacggatcctagaaccatgggtacccttcgagacaatggatct
ctcccagcctttggtacacaggatgtgtcttcgaaacctacaccatataagaataaaagt
cccattcgtcgtcctccacctaccgaagatgatcatgcggtgcttgctgcacctcctgcg
gttccttcaagaggtattccttcaacgaaatccctgtggactgtggatcgaggtgcaggc
gagaaccaaattggtgcaccagccgctcaggcatcaggctcttctgttgctccgaaacca
acaaccactttgacgaaaaaggaagagttcgcgcgccttctaggctcttgtttccaccaa
tcaggcgcttgttttggacgtctgcaacgacatcgaccccgatcgactcttctgatccgg
caaatacattatagcacagaacatcttactctccttaattcaccagctgagctgcggaga
tttggctgtccagttggatttgaagttaagatacctcgaagaggctgtcggttgtctaaa
caaacgcgacccaactactacacaacacggaccaagaataataagtcttctaagccgccg
tttagacactttcttgaacaatgccatggtcggaggaatatccaagctgtctccttcagt
ccacagccgcattgtcaaactaaatcatttcgccatatcattgttcgaaactaa

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