Opisthorchis viverrini (Southeast Asian liver fluke): T265_04495
Help
Entry
T265_04495 CDS
T04902
Name
(RefSeq) hypothetical protein
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
ovi
Opisthorchis viverrini (Southeast Asian liver fluke)
Pathway
ovi03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ovi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
T265_04495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ovi03400
]
T265_04495
DNA repair and recombination proteins [BR:
ovi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
T265_04495
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
Ku_PK_bind
Ku_N
Motif
Other DBs
NCBI-GeneID:
20318677
NCBI-ProteinID:
XP_009167514
UniProt:
A0A075AGG9
LinkDB
All DBs
Position
Unknown
AA seq
974 aa
AA seq
DB search
MVPPLSDSPKGDNVGDGDTNGQTAYANRKKLKMESEKDDINQVTISPAAAERVENHSTNP
SSGMIRVDAKLFLLMFVVRFLDLFSREICYRWSFIHALWGLRPTLSCVIQYNRSAVTSLR
CPAAVPPEWSTRAEILPGYPSLTRGSRKTEVGFEPRTLWFAVVCIILDVGVHMATDIDQA
VDCLKLLIQRKFFQEKKEEVAVVLCGTEATDNDLADGNGNFVHISLVRTLAPLDWDLLEF
FNSESLLSTDDADVVDALIVGVNHLVTQCNDRKGLSEKRILLISNLLGPADISQLTEVAH
NLRIADVKLSLIGFSLPEGSAPPKSEPATLSPDSNPGPSSSRSNGDKQFKVHPAQKAIGD
LWSQLNGESYTFDEAIPALAYFETRAVAQRGWKVDFQIGDSLSLPVEGFTQVREARPPTL
TQLYAACPSTPIRAITTYCTQDENATELRSTQVIRGHRYGTTMVPFTAEDKAAVQPAAEK
CLTLIGFTPASNVPINLHLGDSVLVFVANCPSENHPVAQGLAALAQALFELNGVALVRRV
YNRVSAPRLGVLIPEVRGTQVALFYTDLAFADDIRTFQFPSLPLRTTPSKSYVKPDRHTP
TDEQLKVMDEFVSSLLLGKMSDEDDSDAECNERQDEASTGLNLDVKPEQLPSPWIQRLFT
CFRERGLNPTESLIPSTSNQSMDSWLVAQNLPGLEQLLSRIAPVYENASGNDPVSLARCH
LLDCLPTLSSVEKEQEAESGASVAKRRRLMATELFGLQTNDSTLTGNNTQASNSFTGGGG
LLLNSGSALSQVSPLTDVGSVDPVGDFDKLLAQGDIRFASQRLESRIIQLVTDPYTGSIL
RPRAISCLVAYRERAIRAATNNPNPDLRLAQDYNTFIRTWREDLYLRGHLQANRPNGGAM
DPRLSFWVETITQGFGLISDDEVQGIEVSRMEADSFLSSSTKNEPPVDQSCGSPSAPPTP
TNGVVTEQLLDELE
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggtaccacctctttcagatagtcctaaaggtgacaacgttggagacggcgatacaaac
ggccaaacagcctatgccaacaggaagaaactgaaaatggagagtgaaaaggacgacatc
aaccaagtgaccatctctccagctgcagccgagcgcgtcgaaaaccactcaacgaatcct
tcttcgggtatgattcgcgtcgacgcaaaactgttcttgctgatgtttgtcgttcgcttc
cttgacctctttagtcgcgaaatctgttatcgttggtcattcattcatgcactttgggga
cttaggccgactctcagttgtgtaatacaatacaatcgttcagctgttacatcccttcgg
tgcccagctgccgtgccacccgaatggagcacgagggctgagatacttccaggttatcca
agcctaacaagaggaagtcgaaagacagaagtcggattcgaaccacgtacactttggttc
gcagtggtttgtatcattctggatgtaggtgttcatatggccacagatattgaccaagcc
gtggactgtttgaaactcttaatccaacgcaagttttttcaagagaaaaaagaggaagtt
gctgtcgtcctttgtggcacggaagctacagataatgatttggctgatggaaatggaaat
tttgtccacatttcattggttcgtaccttagctccgctggattgggatttgttggaattc
ttcaattcagagtcacttttgtctaccgacgatgctgacgtcgtggatgctctgattgtt
ggtgtcaatcatctcgtgacgcaatgcaatgaccgcaaaggattgtccgagaaacgcatc
ctacttataagtaatctgttgggcccagcggatatttcgcagctaaccgaagttgcccac
aacctccgtattgctgatgtgaaactaagtctgatcggtttcagtcttcccgaaggctct
gcaccaccaaagagcgagcctgctacacttagcccagattccaatcctggaccttccagc
agccggagtaacggagataaacaattcaaggttcacccagctcaaaaggctattggtgat
ctatggtctcagttaaacggcgagtcctacacattcgatgaggctattcccgcacttgct
tatttcgaaacacgcgccgtcgcgcaacgtggttggaaggttgacttccaaattggcgac
tccttatccttgccggttgaaggcttcacacaggtccgagaagcccgtccaccaacactg
actcaactctatgccgcttgtccttccacgcccatccgtgccataacaacatactgtact
caggacgaaaatgccacagaactgcgatcgacacaagtcattcggggccatcggtacggc
actaccatggtgcctttcacagctgaggacaaagcggctgttcaaccggcagcggagaag
tgtctaactctaatcggcttcacaccggcctctaacgtgccgatcaaccttcacctgggc
gacagcgtacttgtgtttgtggccaactgtccttcagaaaaccatcccgtggcccaaggt
ctcgctgcgctcgcacaggctttgtttgaattaaatggagtggcgcttgtacgccgtgtg
tacaaccgcgtttctgccccgcggctcggcgttcttattcctgaagtgcgcggtacgcaa
gttgctctattctacacagatttagcctttgccgatgacattcgcacattccaattcccg
tcactcccgttgcgtacaacgccttcgaaaagctatgtgaaaccggataggcatactcca
acggatgagcaattaaaggtcatggatgagttcgtctcctcactactgttgggtaaaatg
agtgatgaggatgactcggatgccgaatgtaatgaaaggcaagacgaagcaagtaccgga
ctgaatcttgacgtcaaacccgaacaacttcccagtccttggatccagcgtctcttcact
tgtttccgggagcgtggactcaaccctactgaaagccttataccgtccacatccaaccaa
tcgatggattcatggttggtggctcagaatttgccaggactagaacaactgctttccaga
atcgcaccggtttacgaaaatgcaagtggaaacgacccggtgtctttagcaagatgtcat
cttctggattgtcttcctacattatcttcagttgaaaaagaacaagaagccgaatctggt
gcatcggttgccaaacgacgtcgattaatggccactgaactgtttggactgcaaaccaat
gatagcacactaaccgggaataacacccaagcgagtaattcgttcactggtggcggaggc
cttctactcaactctggttcagcactttctcaagtctcgccgctaacggatgtcggttct
gttgacccagttggcgactttgataagttgcttgcacagggagacatacgctttgcctct
cagcgtttggagagccgcatcatccaactggtcaccgatccttacacggggagcattttg
cgaccaagggctatatcttgtcttgttgcctatcgggaacgagcgatccgcgcagcgacc
aataacccgaaccccgatttaaggttggcacaggattacaatacatttattcgtacatgg
cgcgaagatctatatttacgtggccacttgcaggcaaaccgaccaaacggaggagcaatg
gatccgcggctgtcgttttgggtggagacgattacacaaggatttggcctgatcagcgat
gatgaggtgcaaggtatagaggtttctcggatggaagcggactcgtttctgtcctcttcc
acgaaaaatgaaccacctgttgaccaaagctgtggctctccatcggcaccacccaccccg
acgaatggagtagtgacggaacagctgctcgatgaactggaataa
DBGET
integrated database retrieval system
