Opisthorchis viverrini (Southeast Asian liver fluke): T265_05171
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Entry
T265_05171 CDS
T04902
Name
(RefSeq) hypothetical protein
KO
K01164
ribonuclease P/MRP protein subunit POP1 [EC:
3.1.26.5
]
Organism
ovi
Opisthorchis viverrini (Southeast Asian liver fluke)
Pathway
ovi03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ovi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
T265_05171
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ovi03009
]
T265_05171
03016 Transfer RNA biogenesis [BR:
ovi03016
]
T265_05171
03029 Mitochondrial biogenesis [BR:
ovi03029
]
T265_05171
Enzymes [BR:
ovi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
T265_05171
Ribosome biogenesis [BR:
ovi03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
T265_05171
Transfer RNA biogenesis [BR:
ovi03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
T265_05171
Mitochondrial biogenesis [BR:
ovi03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
T265_05171
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
POP1_N
POPLD
GCV_T_C
Motif
Other DBs
NCBI-GeneID:
20319353
NCBI-ProteinID:
XP_009168367
UniProt:
A0A074ZPZ3
LinkDB
All DBs
Position
Unknown
AA seq
963 aa
AA seq
DB search
MSTRELVDETRSDYSCFNVVHLATARAAELAAFEAEVNVTTAHAITCLQRLPVRLRRRAA
SHRVNRLPRRLHRHFQQPLNNNKGQLVAAQPKRAKLKSRRYRRRHLRLLAMATRIAATSS
SYSELSSNRKTLWLPTHLWHAKRYHMINIWGWRLPQAPNDKIFKACQDAALNGCLVFDLS
FWNCFELIGTELALASCLKSVSRICPTFTQCPVPLSTNGTPDLPCEQPGLLFADVQAEDI
LNITRPVLGPVRILWGPRNEPHEGHRRVYLWNHPEISADAWQLFVTCSQTEGICVRNLTG
RVSRLCTLGRQSHQLLADVFSPQNPDSGVGDWKLWEELTKRARQASCMPLGAVLFLFNCK
EFRENRPALKTRDRDWILAPAGSQDQASETTHRTPSGARLSWSEFSYIGSTKPGNFSDFF
TDTGTAEVSDSSVLLFPASSNSEGVNVILVQNATPSILTNNPHSVGWDVILIRSRVMDHS
AEVPNLREALSVRDLLIACVYRGAEVGGLREWQYWSTVQTQGNGWLASYPYFLWPDTPGG
RKSDEEMSKERQQVFSPALKTRDRDWILAPAGSQDQASETTHRTPSGARLSWSEFSYIGS
TKPGNFSDFFTDTGTAESSNSEGVNVILVQNATPSILTNNPHSVGWDVILIRSRAMDHSA
EVPNLREALSVRDLLIACVYRGAEVGGLREWQYWSTVQTQGNGWLASYPYFLWPDTPGGR
KSDEEMSKERQQVFRIIFLRFIHEYYPEAESIQLPLHRHAMHASTFLRFSRRPPNLRPDY
RRLGTPNPFHTPWNELIRDNLSSSHVDTKCTCFVLRDPCFLRLVVQRMISGDPRARLTLD
QLVSHHPNLPYALVPVQVDAIGRGIPKPCATLYCPIDEQDFLDVSKADHAEKQESPKVTR
SVLGYVVTGGFNHSLGRATGLAFISLAAVVRTIHSTNLHGLTRILMKNTRTVRLRPVRIS
VLL
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atgtctaccagagaacttgtcgatgaaacacgcagcgattacagctgtttcaacgttgtt
catctggcaactgcgcgtgccgctgaactggctgcatttgaggccgaggtcaatgtgact
acagcccatgcaattacttgtttacagcgattgcctgtgcgtcttcgtcgacgagctgca
agtcatcgcgtcaatcggctaccccggaggctgcatcgacactttcaacaaccactcaac
aacaacaaaggacaattggttgctgctcaacctaaacgtgccaagttgaaaagtcgtcga
tatcgacgacgacatttgcggttgctggctatggctactcgaattgccgcaacatcgtca
agctatagtgaattgagctctaatcggaagacgttatggttgcccacccacctctggcat
gccaaaaggtatcatatgatcaatatctgggggtggcgtctacctcaggctccgaatgat
aagatatttaaggcctgtcaggatgcagctttgaatggttgcctggttttcgacttgagc
ttctggaactgtttcgaactcattggtacggaactggcactagcgagttgcttgaagagc
gtatcgcgaatttgtcccacattcacccaatgccctgtgcccctcagcaccaacggaaca
ccggaccttccctgtgagcagccaggattactgttcgctgatgtccaggcagaagatatc
ctgaatatcacccgaccagtcctggggccagtacgcattttatggggtccgcggaatgaa
cctcacgaaggccatcgccgtgtgtacttatggaaccatccagaaatatctgcagatgcg
tggcagttgtttgtcacttgttcacaaactgaaggaatctgtgtacgcaatctaactggt
cgagtttcgcgcctttgtacactgggacgtcagtcgcaccagttgttagctgacgtgttt
tcccctcaaaatccggactctggagttggtgactggaagctatgggaggaactaacgaag
agggcccggcaggccagttgcatgcccctgggtgctgttttattcttgtttaactgcaag
gaatttcgagagaatcgtcccgcactgaaaactcgtgaccgagattggatcttggcacca
gcaggctcgcaggatcaggcatccgagacaacacatcggactcctagtggagctcgactg
tcgtggtcggaattttcttacattggatcaaccaaacccggcaacttttcggactttttt
actgacacaggaacagctgaagtaagtgattcttccgttcttctctttcctgcatcatcc
aactcagagggtgtgaacgtgatcctcgtgcaaaacgcaactccgtcaattttaaccaac
aatccacattcagttggatgggacgttattttgatccgatctcgggtgatggaccattca
gctgaagttccgaaccttcgggaagcattatctgtccgggatcttctcattgcttgcgtc
taccgtggagccgaagtcggtggtctcagggaatggcagtattggtctactgttcagacc
cagggaaatggctggttagcctcatatccctactttctatggcccgatacgcccggcggt
cgaaagtccgatgaagagatgtccaaggagcgacaacaggttttcagtcccgcactgaaa
actcgtgaccgagattggatcttggcaccagcaggctcgcaggatcaggcatccgagaca
acacatcggactcctagtggagctcgactgtcgtggtcggaattttcttacattggatca
accaaacccggcaacttttcggacttttttactgacacaggaacagctgaatcatccaac
tcagagggtgtgaacgtgatcctcgtgcaaaacgcaactccgtcaattttaaccaacaat
ccacattcagttggatgggacgttattttgatccgatctcgggcgatggaccattcagct
gaagttccgaaccttcgggaagcattatctgtccgggatcttctcattgcttgcgtctac
cgtggagccgaagtcggtggtctcagggaatggcagtattggtctactgttcagacccag
ggaaatggctggttagcctcatatccctactttctatggcccgatacgcccggcggtcga
aagtccgatgaagagatgtccaaggagcgacaacaggttttcagaatcatattcctacgt
tttattcacgaatactacccagaagccgaatcaatccaactgccactgcaccgccatgcc
atgcacgcatcgacctttctccgtttcagccgccgtcctccaaaccttcgcccagactac
agacggctggggacgccgaatccgtttcatacaccctggaacgaactaataagagacaac
ctgtcctctagtcatgtagacaccaaatgtacctgctttgttctccgtgatccctgtttt
ctgcgtttggttgtacaacggatgatctccggagacccccgggcgcgactaacactggat
cagctggtcagccatcaccccaatcttccctatgcgttggtcccggttcaagttgatgct
attggacgaggaattccaaaaccatgtgcaacactctactgtcccattgacgaacaagac
ttcctggacgtgtcaaaggcagatcacgcggagaaacaagaatctcctaaggttacccgc
tctgttcttggctatgttgtaacaggaggcttcaaccatagtttgggacgggcaaccggc
ttggcattcatcagcttggccgcagtagttcgaaccatccattcgacaaaccttcatgga
ttaacgcgaatcctcatgaagaacacgcgtactgttcggttgaggcccgtgcgtatttca
gtgcttctgtga
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