KEGG   Opisthorchis viverrini (Southeast Asian liver fluke): T265_05258
Entry
T265_05258        CDS       T04902                                 
Name
(RefSeq) hypothetical protein
  KO
K14768  U3 small nucleolar RNA-associated protein 7
Organism
ovi  Opisthorchis viverrini (Southeast Asian liver fluke)
Brite
KEGG Orthology (KO) [BR:ovi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ovi03009]
    T265_05258
Ribosome biogenesis [BR:ovi03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    T265_05258
SSDB
Motif
Pfam: BING4CT WD40_Prp19 WD40_CDC20-Fz WD40 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_EML EIF3I WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 Beta-prop_SCAP Mala_s_1-like Beta-prop_WDR19_1st WD40_MABP1-WDR62_1st Beta-prop_Vps41 Beta-prop_WDR19_2nd Beta-prop_IFT140_1st Beta-prop_Nup120_160 Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 20319440
NCBI-ProteinID: XP_009168491
UniProt: A0A075AFI2
LinkDB
Position
Unknown
AA seq 533 aa
MDTSHMPTRFHRKRAERFNKKVRQAQQHTERAAIFGTVTAGEFSKEPGERVTQKDILAEV
DIGSATKRFDISLRGGPYAIDYSKNGRFLAYCGKSGNVAGFDWLTKNLLFDINVAQECKD
IKFLHQETFIAVAEPKSTSIYDNQGIEVHCIKQLHQILRLEFLPYHFLLVASAANGFIYY
LDCTVGSVVSSLPTYMGRLGVMCQNPSNGVIITGHNNGCVCMWIPSEKCSVVKMFTHQSG
LTSVACDRTGRYLATCALDRKLKVWDVRSTYDPLSEINLPVSASSMDYSQRGLLAIGAGN
TVQVLKDPHFGSIGSTSSGTVLPEQEFIADGVTRRVLTNAYLNHYAVRPVHRVRFCPYED
VLGVGTSAGISSILCPGSAEPNYDALEENPFANKRYRQEREIKRLLDKIPYTMISLESLV
GKVRREDILEEWEKKKSMLLGEPLKIPMPEVNKNKRKGRSKPGRIEAKKQHIRLERKMFS
MKAALGVTGRKRPQKQQSKHEEKSKPSDILVSRKKLAKKRIRSALDVLIPPVD
NT seq 1602 nt   +upstreamnt  +downstreamnt
atggatacgtctcatatgcctacgcgattccatcgaaaacgagcagagcgtttcaataaa
aaggttcgtcaggctcagcaacacacagaacgggctgctatctttggcacggtcactgct
ggggagttctcaaaggaacctggagaacgagttactcaaaaagatattcttgccgaagta
gatattgggtcagctacaaaacggttcgacatatcattgcgcggtggtccctatgcaatt
gattactctaaaaacggaaggtttctggcttattgtgggaagtcgggaaatgtggctgga
tttgactggttaactaagaaccttctgttcgatattaacgtcgctcaggaatgcaaggat
atcaaatttctacaccaggaaactttcattgccgtcgctgagccaaaatccacttccatt
tatgacaatcaaggaatcgaagtgcattgtatcaaacaactgcatcagatactccgtctg
gagtttcttccctaccattttctcctcgtcgcatcggctgcaaacgggttcatttattat
ttggactgtacggtcggctcagttgtgtcctcgcttcctacttatatgggtaggctgggg
gtgatgtgccagaatccttcaaatggagttattatcaccggacacaataatggctgtgtg
tgtatgtggattccctctgagaaatgttctgtcgtcaaaatgtttacacaccaaagtgga
ctaacgtctgtcgcctgcgatcgaactggaaggtatttggctacttgtgctctggatcgt
aagctcaaggtatgggatgtccggtcgacctacgatccgctgtcggagataaatctacca
gtttctgcttccagtatggattacagtcagcgaggtttgttggctataggcgctggaaac
actgtacaagttctgaaggaccctcactttggatcgattggctccacctcctctggcacc
gtcctaccagaacaggagttcattgctgatggtgtgactcggcgtgttctgactaatgcc
tacctaaaccactatgcagtgcgacctgtacatcgagttcgattttgtccgtatgaggat
gtgttgggtgttggcaccagcgcagggatctcatctatcctttgtcccggaagcgcggaa
cctaactatgatgcccttgaagagaatcccttcgccaataaaagataccgccaagaacga
gaaatcaagcgcttgctcgataagatcccgtacacgatgatctcattggaatcactagtc
ggtaaagtccgtcgtgaagacatcttggaggaatgggaaaagaagaagtctatgttgctc
ggtgaacccctcaaaatacccatgcctgaggtgaacaagaacaaaaggaaaggtcgttct
aaaccaggccgcatcgaagccaaaaaacagcacatacgtcttgaacgaaaaatgtttagc
atgaaggccgctctcggagtgaccggacgcaaacgacctcagaagcaacaaagcaagcat
gaagaaaaatcaaaacccagcgacattctagtctcccgaaagaaattggctaagaaacgc
atcagatccgctctcgatgtgctgatccctcctgtagattaa

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