Opisthorchis viverrini (Southeast Asian liver fluke): T265_05903
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Entry
T265_05903 CDS
T04902
Name
(RefSeq) hypothetical protein
KO
K11374
elongator complex protein 2
Organism
ovi
Opisthorchis viverrini (Southeast Asian liver fluke)
Brite
KEGG Orthology (KO) [BR:
ovi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ovi03016
]
T265_05903
Transfer RNA biogenesis [BR:
ovi03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
T265_05903
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Tau95
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WDR55
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML
EIF3I
Beta-prop_IFT140_1st
Beta-prop_Aladin
RAB3GAP2_N
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
20320085
NCBI-ProteinID:
XP_009169302
UniProt:
A0A074ZU40
LinkDB
All DBs
Position
Unknown
AA seq
1244 aa
AA seq
DB search
MGGNSNGFGEINYVRKPRHNFGRVISFEDPTPEAPHPQAVERLMAHYPDQHKVLFELDKL
FKGRPIWLRNAIAKSVTTNLRSALYKGAIICFAYYMVRGPWSRSWIRYGYDPRTDPEARF
YQVIDFRIKSHVLIRQILERNIRYSSMSSNKTRRGRLNWRRPDGSLHWLSDAPQTQTKNQ
SSTSLKSDAEVDMEGDLEMDYANEMAEDAVDVESGSLHVGYSFSRDHLPTAQQMLICLSD
IDIPEVQAIVAEKPERTPTCPMNSSVSPKTNDANSCCSSELTDLILCPYTSACVNRRSGC
THAVSIDAHHKVSGNLLAFGASHAICLARTIEAGRRECDDGFRILRMLLGHNSPVTCLRW
MTHVSKDFPVPYLVLASADNTGNIKIWACKKESVITEPWCSAAGDWSLILEVSLPGSLSA
NALDGLIAHSSSCTEGYQGIDDVLILDVAADTSMYTWHIGLHRTQEISPVVLSHRATNRF
PSMCLCLRTCLWMHPSVKPIHFVFVGLDSGKTEIYSEYLTETQKETFDQLTCSAVLSGHT
DWVRCLDATQNSFECTTSLYLATGSQDNVIRLWNIFQSSPVIDISKHSSGAKICDLNLPS
EGKPAEFTLSIASESVLSGHDNWVTGVAWSPEDSRFPPPLLSSSMDKSLIVWSPPQSTGG
NVHIWLEGARLGNLGGAGMGFMDGFWLLSDPSTICAQNFQGSLSVWHFSADKSFWSPGLP
ICGHSGSVTDIAWSKKKVSDKCLIEKNRSVTPTYLLTTGSDQTVRVHTPRRLSVATGDVS
QLTGDKAKEGWVWHELARPQVHGYDMNAICSLSTIGYVSAGDEKVARVFTATRAFVESYQ
DAIGLEGYSLADCYISEQPVEALAEGAIQPTLGLSNQMTGSESGSVSFNGAEVDSTIPTE
HGDAPLHIGAISIPTEDRLQHATLWPETKKLYGHPYEVYSLAAHPNRRLVASACVASKQI
HAYIILWNGMSDWTIHQRLVHHQLTVTQMAWSLDGRHLLAVSRDRTWSVWSCDGTPVTDA
ALPNYCLTAYPQKGHGHSRIIWTCAWSPDNDYFVSGSRDQTILVWPTPDASSSIEPAPKA
QRPLIAPKLFAAAVTALDICRLSDHHTSSDRHSHLVAVGLETGSLLLLTLSSNRFSQVSG
SNLPEWSALIQIPAFWSHVSGSNLPEWSALIQIPKFWSHVPGKHIRRVAFEPSSNSFAGE
SESNSILFASGADDGIVHIFEIDGDKLIMRISQSSPQQSNPQSV
NT seq
3735 nt
NT seq
+upstream
nt +downstream
nt
atgggtggaaattctaacggattcggcgaaattaattacgtcaggaaaccccgacacaac
ttcggccgtgttataagcttcgaagatcccactcccgaggctcctcatccacaagcggtg
gaacgattaatggcgcattatccagatcaacacaaagtattgttcgagcttgataagctg
tttaaaggtcgtccgatctggcttcgaaacgcaattgccaaaagtgtcactacaaatctt
cgatcggctctctacaaaggtgctatcatatgcttcgcctattacatggtacggggacct
tggagtcgcagttggattcgatatggctacgaccctcgcaccgacccagaggcgcgtttt
tatcaggtgatcgatttccgcatcaaatcacacgttcttattcgtcaaatattggagcga
aacatccgatattcttcgatgtcttcgaacaaaaccagacgtggaagactgaactggcgg
aggccagatggaagtcttcactggttgagtgatgctccccaaacacagacgaagaatcag
tcatcgacttctctaaagtcggacgccgaggtcgatatggagggtgacctggagatggat
tacgccaacgaaatggccgaagatgctgttgacgtagagtcgggtagtttgcatgttggc
tacagcttttcacgtgaccatctaccaacggcccagcaaatgctgatctgcttatcagat
attgatatcccggaggtacaggccatcgtggcagaaaagccggaacgcacccccacctgt
ccaatgaattcttctgtctcaccaaaaactaatgacgcaaactcgtgctgctcgagtgaa
ctcacagatctgattctttgtccatatacttcggcttgtgttaaccggcgttcgggctgt
actcatgcggtctccattgatgcacaccataaagtttctggaaatctactagcctttgga
gcaagtcatgcaatttgtcttgcacgaactattgaagccggccgaagagaatgtgacgat
ggctttcgtatactccgtatgttacttggccacaacagccccgtcacttgcctgcgatgg
atgacccacgtttcgaaagacttccccgtcccctacctggttctggcatctgccgataat
acaggcaatataaaaatttgggcttgtaaaaaagaatccgtcatcactgagccttggtgc
agtgctgctggcgattggtcccttatacttgaggtgtcattacctggaagtctttccgcc
aatgctttggacggtttgattgcgcattcctcttcgtgcactgaaggctaccaaggcata
gatgatgttttgatcttagacgttgcagccgatacatcgatgtatacgtggcacatcgga
ctacacagaactcaggaaatcagtcctgttgtcttatcacatcgtgccaccaaccggttt
ccgtccatgtgtctctgtcttcgaacgtgtctgtggatgcatccatctgtgaagcctatt
cattttgtatttgttggtcttgacagtggaaaaacagaaatctactctgaatatctcact
gagacccaaaaggaaaccttcgatcagttaacttgttccgctgttctttctgggcacact
gattgggttcggtgtttggacgccacacaaaacagctttgaatgtacaacatctctgtat
ttggctactggcagtcaggataatgtcatccgattatggaatattttccaaagctcacca
gttattgatatttcaaagcactcgtccggagcaaagatttgtgatctaaatctcccttcg
gagggcaaaccagcggaatttactctttctatcgcctcggaaagtgtattatctggccat
gacaactgggtaacaggggtagcctggtctcccgaagacagtcgtttccctccgccactt
ctttcttcaagcatggataagtcgttgattgtttggtctccaccgcaatcaaccggtgga
aacgttcatatatggcttgaaggggctcgacttggtaacttgggaggagcgggcatgggt
tttatggatggattctggctcttgtctgatccgagcaccatatgtgcacaaaacttccag
ggcagtctttctgtgtggcacttttctgctgataagtccttttggtctcctgggctcccg
atttgtggtcattctggatcggtgaccgatatagcttggtccaagaaaaaggtcagcgac
aagtgtttaattgaaaagaaccgctcagttacgcccacctatctgctgacaactggcagt
gatcaaacggttcgagttcatactccacgaaggctgtcagtcgccaccggtgacgtttct
cagctgactggggataaggcgaaagaaggttgggtatggcatgaattagccagaccacag
gtacacggctacgatatgaatgcgatttgcagtctatctaccatcggttacgtgtcagcc
ggagacgagaaggtggcgcgcgtattcactgcaacacgcgcatttgtcgaatcctatcaa
gacgctatcggtcttgaaggctactcactcgcagattgttacatttcggagcaaccagta
gaagccctggctgaaggtgccatacagccaacccttggtctgtcaaaccagatgaccggt
tcggaatctggttccgttagtttcaacggagctgaagttgatagcacgattcctactgaa
catggggacgcaccgttacacattggtgctatttcaattccaaccgaggatcgcttgcaa
catgcgaccttgtggccagaaacaaagaaactctacggacacccatatgaggtttactcg
ctagctgcacatcccaatcgtcggttggttgcatccgcttgcgtggccagcaaacaaatc
cacgcctacattatcttatggaacggaatgtccgattggactatccatcagcgtcttgtt
catcaccagctgacagttactcaaatggcctggagccttgatggacgacacctgctagcc
gtatctagagatcgcacatggagcgtgtggtcctgtgatggtacgccagttactgacgct
gccttacccaactattgtttaacggcgtaccctcaaaagggacatgggcattcacggatc
atctggacttgtgcgtggagccctgataatgactatttcgtctccggttcacgagatcaa
accatcctcgtgtggccaacaccggatgcgtcttcatctattgagccagctccaaaagcc
caacgtccgctgatagcacccaagttgtttgctgcagcagtcactgctctggatatatgc
cgactttcggatcaccatacatcctctgaccgacactcacaccttgtggctgttggttta
gaaactggtagcttacttctcctcactctttccagcaaccggttttcccaggtttccggt
tccaatctcccagaatggtccgccttgatacaaatccctgcattttggtcacatgtttcc
ggttctaatctcccagaatggtccgccttgatacaaatccctaaattttggtcacatgtc
ccgggcaagcacatcagacgtgtcgcgttcgagccttcttccaattcattcgctggagaa
agtgaatccaattcgatactttttgccagtggagctgacgatggaatagtacatatattt
gaaattgatggggacaagctaatcatgcggatttcacaaagttctccacagcaatccaat
ccacagtctgtataa
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