KEGG   Opisthorchis viverrini (Southeast Asian liver fluke): T265_06245
Entry
T265_06245        CDS       T04902                                 
Name
(RefSeq) hypothetical protein
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
ovi  Opisthorchis viverrini (Southeast Asian liver fluke)
Pathway
ovi03020  RNA polymerase
ovi03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ovi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    T265_06245
  09124 Replication and repair
   03420 Nucleotide excision repair
    T265_06245
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ovi03021]
    T265_06245
   03400 DNA repair and recombination proteins [BR:ovi03400]
    T265_06245
Transcription machinery [BR:ovi03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     T265_06245
  RNA polymerase III system
   RNA polymerase III
     T265_06245
  RNA polymerase I system
   RNA polymerase I
     T265_06245
DNA repair and recombination proteins [BR:ovi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      T265_06245
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-GeneID: 20320427
NCBI-ProteinID: XP_009169719
UniProt: A0A074ZT17
LinkDB
Position
Unknown
AA seq 136 aa
MGDDYGGGADDFESDEDILDEVPEEELEAKPDAVTYVSADDPSRVASGAVITGPVEKSKR
ITTPYLTKYERARVLGARALQLSMSAPVMVELDGERDPLKIAEKELRANKIPIIIRRYLP
DGSFEDWSLDELILTE
NT seq 411 nt   +upstreamnt  +downstreamnt
atgggcgacgattacggcggtggggcggacgactttgagtcggatgaggacatacttgac
gaggtcccggaagaggaacttgaagcgaaaccggatgcggtaacatatgtatccgccgat
gatccttctcgagtggcttccggtgcagtcatcactggaccagtggagaaaagcaaacgg
ataactacaccctacttgacaaaatacgaacgtgcacgagtgctgggtgcacgtgctctc
cagctgtctatgtccgctcccgtcatggtagaactcgatggtgaacgtgatcccctaaaa
atcgctgaaaaggaactgcgtgcgaataaaattcccataattatccgcaggtacctccca
gacggaagttttgaggattggagtctagacgagctgattttaacagagtga

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