Opisthorchis viverrini (Southeast Asian liver fluke): T265_06248
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Entry
T265_06248 CDS
T04902
Name
(RefSeq) hypothetical protein
KO
K06099
cold shock domain protein A
Organism
ovi
Opisthorchis viverrini (Southeast Asian liver fluke)
Brite
KEGG Orthology (KO) [BR:
ovi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ovi03000
]
T265_06248
03041 Spliceosome [BR:
ovi03041
]
T265_06248
Transcription factors [BR:
ovi03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Cold-shock domain factors, DbpA-like
T265_06248
Spliceosome [BR:
ovi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
T265_06248
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CSD
Motif
Other DBs
NCBI-GeneID:
20320430
NCBI-ProteinID:
XP_009169722
UniProt:
A0A074ZT23
LinkDB
All DBs
Position
Unknown
AA seq
480 aa
AA seq
DB search
MTSDSEVMLKNDGTRMEKKVVATRITGVVKWFNVKSGYGFINRTDTKEDIFVHQSAILKN
NPHKWQRSVGDGEEVEFDVVQGDKGLEATNVTGPHGVPVQGSKYAADKRRYRSRSFGRWR
PCQLICGRPNLSLARNQAPIFTRSSSSDSRVASRYDEMAVETDRYSLNGPRMSRNQFFPH
QPPMMPLLPHQNMFFPRRPLNMRQVMNYRGAYFGPPIIFGYRRGANLLRRRFATAYEQSG
NCPSMNVLRPGAFSGQPNGGSSRYPVLAYATDRRDPPVLAVPYEPVSGFRSMKSFRGRVA
TNVGRGRGAYSYGFSSLPKGKDHKPSTVQGTSEPSVNADTEQSTAQNAVKVPITDEKVEQ
ENNETAQNKPNEEGNEQLILAKQEMKMTDKPISGPKVEASGDTAEDTVTTSEPVTKKIES
TIEITDEKKLVDTTLSSEMYMLVKQPFPETTSTPFANGLCRVEGEQALASRCQRFNKFWL
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgacatctgattccgaagttatgcttaaaaatgacggaactcgaatggaaaagaaggta
gttgcaacccgcataaccggggtagttaagtggttcaacgtaaaaagtggatatgggttt
atcaatcgtactgacacgaaagaggatatatttgtgcatcaaagtgcaatcctcaaaaac
aatcctcacaagtggcaacgatctgttggtgatggtgaagaggttgaattcgatgtagta
caaggtgacaaaggacttgaggctacgaatgtcaccgggccacacggtgtacctgtccaa
gggagtaagtacgcagccgataagcgtcgctatcgttctcgctccttcggccgatggaga
ccttgccaattaatatgtggaagaccaaatcttagtttagcacgaaaccaggcaccaata
ttcacaaggtcatcttcaagtgattcccgggtcgcctcacgatatgatgaaatggcggtg
gaaactgacagatattcactgaatggtcctcgaatgtcaagaaatcagttctttccacat
caacctccaatgatgccactgctaccccatcaaaatatgttctttcctagacgcccactt
aacatgcgacaggtgatgaattatcgtggagcctatttcggtcctccaataattttcggc
taccgccgcggagcaaatctacttcgacgccgatttgctaccgcatacgagcagtcgggt
aactgccccagtatgaatgtgcttcggccaggtgctttctctggacaaccaaacggtgga
agttcccgttacccagtgttggcttacgctactgatcgccgcgatccaccagttttagca
gtcccttatgaaccagtatccggatttcgctcaatgaaaagcttccgtggaagagtggca
acgaacgtcggtcgtggaagaggtgcatattcctatgggtttagtagtctgccgaaagga
aaggaccacaagccatcgacagtacagggcacatcagaaccttccgtcaatgctgacacg
gagcagtccacagcgcagaatgctgtgaaagtaccaataactgacgagaaagttgaacag
gagaataatgaaactgcacaaaacaaacccaatgaggaaggaaacgaacaattaattctc
gcgaaacaagaaatgaagatgacggataagccgatatcagggcccaaagtcgaagccagt
ggagacacggcagaggataccgtaactacttctgaacctgtgacaaagaaaatcgaaagt
acgatcgaaataaccgatgagaagaaactggtggataccaccttgagttctgagatgtac
atgttggttaaacaaccgtttcccgagacaacctctaccccgtttgcgaacggactatgt
cgtgtcgagggtgaacaagcgctcgcttcgcgttgtcaacggttcaacaaattttggctg
tga
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integrated database retrieval system
