Opisthorchis viverrini (Southeast Asian liver fluke): T265_06752
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Entry
T265_06752 CDS
T04902
Name
(RefSeq) hypothetical protein
KO
K11125
protein SMG5
Organism
ovi
Opisthorchis viverrini (Southeast Asian liver fluke)
Pathway
ovi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ovi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
T265_06752
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ovi03019
]
T265_06752
03032 DNA replication proteins [BR:
ovi03032
]
T265_06752
Messenger RNA biogenesis [BR:
ovi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
T265_06752
mRNA cycle factors
Common to processing body (P body) and stress granule
T265_06752
DNA replication proteins [BR:
ovi03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
T265_06752
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
PIN_4
EST1-like_DNA_bind
Motif
Other DBs
NCBI-GeneID:
20320931
NCBI-ProteinID:
XP_009170361
UniProt:
A0A075AD80
LinkDB
All DBs
Position
Unknown
AA seq
1534 aa
AA seq
DB search
MSTSSMMLSVQSGFRFHQAPHLDIQQRKGDQNGIQLRGLWLPIAVCVVLHFLLMYAISSL
KEALQKLMFLSPTHARRAEEMIWRKVFYEPLHLYKVYVKNNDRADRVTDFELALKMHLTS
GIGFYQSLLLQLQSEWLDSTRGNLLAWLPVPFHIPTYDESIYEFDVKHVISSFGEKMVQK
CLMYIGDLFRYLLEFNESVGKPLAYAYYNAALNFDPGMGLPHNQLGILDVGRCYGLNAIF
HYLHCLCARVPFEGARRNLLTVLTKNEIRYRKLFGDKPIFGLYARRPNRYRPKDFRKTIT
KFIFLIQCFLTQKADGFTAHHSYVFQDTLLELHLMLNLSSALTLEPDRWLDKIGLDDQSS
VDDVELRGESSVFSEQLTGPIFVRLLMIALLTANLKLLEQTRATRPEEDTAGDLSSTQNS
SEVPVPDSPTESVQSETSSDKVVRTDEFPNIYGLSEPFGPLSFVLQLSELFMSHLATQLN
QHLVTRELRGSCAFDSSIKDHRPAPPDAPGQPTDSGKLVAGEGPCNEIPDRDVNLAERQQ
PQTLELGNSTDSSDGGGGLVRRRIRKVPGGDSTERDLEGTDGEEEDVEEEEEEEEDEMDY
SEEADLSADLWSSDDSSPFHSQDDVDSSALSSDENGEFRSDHRLRRGRLGSGVTKRSARS
GQPVELEGKADTTHGKTHSEAVCGANVRLRRKEQRTDLLDPITEEEAPLRDRRPKAEDSA
DKKPIDSDTDASDTSGLVSTTCRTGRRGARYTNRKMNLSEPDCYDPIWHQDATDRGCIAD
TPIAPYDEEFSAEPEDLSMELGKRVSLISRLYLLASVKVMLDWIQTDCFRPLRFLPHQNS
SPKHTVMQYVIQRWCTQLTLLLNQFYPLFEQILVNSSTNSLTNSDPNDRNPLSPNNPLVQ
FMSAFGMHALEDSLRAPSNQNKLFHSTVASCNHSRMSSQTCPLPEDWLLRGLPSLDAAHQ
HIDFNQAFSTTPFTGLDEGVIRALCMVSAGHHLVHHAAELGVHFTFEPSRTPPFQSFTPG
EKTLAHPKPEVHNLGWSTVPHPSRRRRARYSGGPVYSRGGNRRADFVSPRQGRARWNAKG
SYKRGGHSIAKYSTRPERFEQGWNEDTVQSRRSSRRHSAALPGDPIDGPGNMPGNSHHLP
ENRSRTESEERIDVSELRKQSSNSSLPVEAVRDANTDGEEVACTVDGPSEFSGSHSHDDA
ESRKTQLMRDMARLRLLNEVDQLARQCRTRSPRTHRSASQTDRNVSSVPTTAPDDSRPTQ
LADQLSYEVSQLFVSPYLVVDAFCLASHLPAVKQLVNSGSFVVIIPVAVISHLDYLKKTM
ATARVAIRYLEHETHSGNRFLRLQRPEEQPKEPVQTLRVIPARSSVASNLVELESEEDST
GDSARSASPRVVKRWLSILGCATYFSELKSLEQTNAPSQKPETTEDAEKQQSVPAIHRNS
PTVTTLAHNPASCYDLLSLSHAPPELDLNSEPRTALVTILIGSRDTQPQDTIVPLEFLRL
VHKSGVRIELIRDFLVRWRKRRTTQPRPFSEEEA
NT seq
4605 nt
NT seq
+upstream
nt +downstream
nt
atgtccacttcttccatgatgctatctgttcagagcggtttccgattccatcaagcgcct
cacctcgatatacaacagcggaaaggcgaccaaaacggtattcagttacgaggcctatgg
ttaccgattgcggtatgtgtggttttgcatttccttttgatgtatgcaatttctagctta
aaagaggctctacagaaattgatgtttttgtctccaactcatgccaggagagcagaagag
atgatttggcgcaaggttttttatgaacctttacatctttataaagtatatgttaagaac
aatgaccgagcagatcgtgtgactgactttgagttggccctaaaaatgcaccttacaagt
ggaatcggattctaccagtcgctactattgcaactccagtctgagtggcttgattcgact
cgtggaaacttgcttgcctggttgccagtaccctttcatatcccgacgtatgacgaaagc
atttatgaatttgacgtcaaacatgtaatttcgtcgtttggcgaaaagatggttcagaaa
tgtcttatgtatattggggatttgtttcgttatctactcgagtttaatgaaagcgttgga
aaacctctagcttatgcgtactacaacgcagcactcaatttcgaccctggtatgggtcta
cctcataatcagctcggaatcttggatgtgggacgatgctatggtctgaacgccattttt
cactatttgcactgcctttgtgccagagttccttttgagggcgccagacgtaatttacta
acagttttgacaaaaaacgaaattcgctaccggaagctgttcggcgacaaacccatattt
ggattgtatgcacgtcgtccaaatcgatacagaccgaaagacttccgaaagactatcaca
aaattcatttttctgattcagtgctttctgacgcagaaggccgatggattcacagcacac
cattcgtacgtgtttcaggacactcttttagagctacaccttatgctcaacctcagttcg
gctctaacattggaacccgatagatggttagataagattggactggatgatcaatcttct
gtagatgacgtggaactcaggggagaaagttcggttttctccgagcagctaactggccct
attttcgttcgtctactgatgatagcgctgctgacggccaatctcaagctgttggaacaa
actcgggcaactagaccggaagaagacactgccggcgacctatcatcgactcagaattca
tctgaggtgccggtaccagacagccctactgaatcagtgcagtcagagacaagcagtgat
aaagtggtgcggactgacgagtttccaaatatttacggcttgtctgagccgttcgggcca
ctatcctttgtgcttcagctgagcgaattattcatgtctcacctcgccacgcaactgaac
caacacctggttacccgagagttgcgtggcagttgcgcttttgatagttctatcaaagac
catcgacctgctccacctgatgctccaggtcaaccgacggattctggaaaactggtcgca
ggtgaaggtccttgtaatgaaattcctgaccgggatgtgaatcttgccgaaagacagcaa
cctcaaacgttggagttggggaactcaacggactcttcggatggtggtggtggtttagta
cgtaggcgaatccgcaaagtccccggtggcgactctacggagagggatttagaaggaacg
gatggtgaagaagaggatgtcgaggaggaagaggaggaggaggaggatgaaatggattac
agcgaggaggctgatttgagtgcagatctttggagttccgatgattccagtccttttcat
tctcaggacgacgtagactcctccgctctttcctcagatgagaatggtgagttccgttca
gaccatcgattgagacggggtcgattaggcagtggagttacaaaacgctcagcgcgttct
ggtcaaccagtggaactcgagggcaaggcggacacaacccacgggaagacacactcggaa
gctgtttgtggagctaatgtgcggttgagaagaaaggaacagaggactgaccttttggac
cctatcactgaagaagaagctccgctgagggatcgacgacctaaagctgaagatagtgct
gataaaaaacctatcgattcggatactgacgcgtcagacacatcaggcctggtgtctact
acctgtcgaactgggcgacgcggagcacgctataccaaccgtaaaatgaacttgtcagaa
ccggattgctatgacccaatatggcatcaggacgccacagatagggggtgtattgcagac
accccaatagccccctacgatgaggaattcagcgcggaacctgaagatttgtccatggaa
ctgggcaagcgcgtatcattaatcagtcgtttgtatctgctggcatcagtgaaggtcatg
ttggactggatacagactgactgctttagaccgttacgctttcttcctcaccaaaattcc
agtccaaagcatactgtcatgcagtatgttatccagaggtggtgtactcagctgactttg
ttactgaaccaattctatccattgtttgaacaaatactcgtgaattcgtctacgaattcc
ctgacaaattccgaccccaatgatcgaaacccgctcagtccaaacaacccactggttcag
ttcatgtctgcttttggcatgcatgctcttgaggacagtcttcgtgcgccctccaaccag
aacaagttgtttcattcgaccgtagcctcatgcaaccactcccgtatgagttcgcagaca
tgtccactaccagaggattggcttcttcggggcctcccttctctggacgcagcgcatcag
cacattgactttaaccaagctttctcaacaacaccattcaccggacttgacgagggagtg
atacgcgcactatgcatggtttccgctggacatcatctggttcaccatgcagcagagttg
ggtgttcattttaccttcgaaccatcacgaactccacccttccaatctttcacacctggt
gaaaaaactttggcacatccaaagcctgaagtccacaacctaggctggtcaactgtccct
catccttcgcgtagacgccgtgcgcgatattccggtggacccgtttactcgcgaggtgga
aatcgacgtgcagatttcgtttctccaaggcagggacgtgcacgatggaacgcaaaggga
tcgtacaaacgtggtggtcattcaattgcaaagtactcaacgaggccagagaggtttgag
caaggttggaacgaagatactgtacaatccagacgttcttcccgtcgtcacagtgcagca
ttgcctggtgatccaatcgatggccctgggaatatgcccggaaattctcaccatctgcca
gaaaaccgcagtcgaacggaatcggaggagcgaatcgatgttagcgaactgcgcaaacag
tcttctaacagcagccttcccgttgaggcggtgagagatgccaatacggatggagaggag
gttgcgtgtactgttgacggcccatccgaattctcggggagtcactcccatgatgacgca
gaatcccgcaagactcaactgatgcgggatatggcacgcttgaggcttcttaacgaagtc
gaccagctggctcgccagtgcaggacccgatcacctcgaacgcaccgatcagcttcccaa
acggataggaacgtctcatctgtcccaaccactgctccagacgattcacgtcctactcag
ctagctgatcaactgagctatgaagtgagccagcttttcgtgtcaccctacctggtggtt
gacgcattttgtttggcaagtcatcttccagctgtaaaacagctggtgaactctggctca
ttcgtcgtgattatcccagttgcagttatttcgcacttggactacctcaagaagacaatg
gctacagctcgcgtggctatccgctatttagaacatgaaacacactctggtaaccgattt
cttcgcctacaacgacctgaagaacaaccaaaggaacctgttcagacactgcgggtcatc
cctgccaggagcagtgtggcctcgaatttggtggagttagaatcagaggaagactcaacc
ggtgacagtgcccgaagcgcaagtccgcgagtggttaagcgatggcttagcattctggga
tgtgccacttacttctcagagctgaaaagtttggagcaaacaaacgcacctagccaaaaa
cccgagaccaccgaagatgcggagaaacagcaatctgttccggctatccatcggaattca
ccgactgttacaaccctggcgcacaacccggcatcatgctatgatctcttatctctgagt
cacgctccaccggaattagacttgaactcggaacccagaacggccttggttactattttg
attggttctcgagacacacaacctcaggacacaattgtaccgctggaattccttagactc
gtccacaagtccggagtgcgtattgaactaattcgtgactttttggtgcgttggcgaaaa
aggcgtaccacacaaccacggccgttttcagaagaagaggcatag
DBGET
integrated database retrieval system
