Opisthorchis viverrini (Southeast Asian liver fluke): T265_06784
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Entry
T265_06784 CDS
T04902
Name
(RefSeq) hypothetical protein
KO
K11292
transcription elongation factor SPT6
Organism
ovi
Opisthorchis viverrini (Southeast Asian liver fluke)
Brite
KEGG Orthology (KO) [BR:
ovi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ovi03021
]
T265_06784
03036 Chromosome and associated proteins [BR:
ovi03036
]
T265_06784
Transcription machinery [BR:
ovi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
T265_06784
Chromosome and associated proteins [BR:
ovi03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
T265_06784
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
HTH_44
HHH_9
SPT6_acidic
Tex_central_region
Spt6_S1
SH2
Tex_N
Tex_YqgF
HHH_3
Motif
Other DBs
NCBI-GeneID:
20320963
NCBI-ProteinID:
XP_009170401
UniProt:
A0A074ZFA9
LinkDB
All DBs
Position
Unknown
AA seq
1571 aa
AA seq
DB search
MSSLVDSEASEASELSDEEELGGQKISNKHRPKVPDSSDSEEEEVDLANEEEICRKEGEG
WIVDEEEEEEDGGGSGGSDEDSDDAGDNERDNYRDEDDDALDEEDFQLIRENIGLDLKKH
KKRRLVVDDDDESDGEQVSAKKVAREVDHGREVVARQIFEDDDDEDGGSAADAPNKAASF
RVTGDEEEEEDYDDMGDFIVDDRAGEAPAKTTRRIVHKDAALQQAQDIFGVDFDMSEFEA
FRKGHAAGSEEYSEESEVEYSDDEEASASVRRKQRKPRSSVVLDDKVYELFDPSDLERAY
YSQADERIRKTDIPERFQLRQVPVQSIDPYSPNYAQELTELSDEANWIYRKAFKEEPELK
PPSVIPKILETLKLMRESLFEVPFIAFYRKECVERDLNIKDLWRIYQLDEKWTILNQRKR
NMIQLFQKLHDFFEATSPDDPGSVQKKHATSILKLISCARSAESLEELIDVRLNYLLHYS
SFTEPMQRWFKRKQEKDEAKKDGVEVDENEEESYLPEQGNAIPLTFSFDPLTGRQIRQRQ
ARATASYEVAKRAALGGLVQRFGLSAAQFAENVQDQYLRHDVDQCPMLPLDAAGDFLSPQ
FPTANVALSAARYMLAFEISREPFVRRMMRQMFQSQAVISVRPTPRGVKEIDESHPLISI
KYLKNKPVSDLMGSVLFLHLHNASLEKLLTYEIHLPSEHIRGLSLLDELQRFFHQDEFSS
LVQAWNEERSLVLKQAAEDFIFPVLIRELKDRMLEASQQAVLRMCAKRLFNYLQVAPYPP
DGHRSYETDTENAASPFSGSRGKHSGRGHGDSESHVSGAVWSKGARVLAMAIKDEDDARQ
SVVSAVHLDSNGEVVDFLHLHGLMQSNRVQEDFKKLKEKDMQRLSGFMVKHRPQVIVIGC
DCRRALYLQEDIQRLVDELASERRLPRIHVELMETELSIVFAQSSRASADLPVSYSPLLR
QAISLGRRLQDPLAEFSQLVNTEEEILGVRWHPLQDSLPREKLLEALEIEFINRVNEVGV
DVNRCLSHPHTAGVLQFVSGLGPRKGLHMLKILRHRKMFLTNRMQLVTVIKFGPRVVINS
AGFIKIDTAAVRDLDADDVEILDSTRVHPESYDLAKKMAVDALEYEDNEECDPTTALEEI
VQSPARLRELDLDAFAEELKRQDHGDKHITLYDIRKELNNRYRDYRAPYQSANPEMIFSM
VTHETPETFHVGRLIECRVVAVATRRPRPEQLDNANPTKNETNGLWMCPFCRQDNFQFLN
NVWSHFDNNECPGQAVGLRVQLDNGIAGFIPLRLTDPPAEKLFERAQPGTLIRCRVMKID
ITKFNVELTCKQSDLQDERHMWRPRPDPFYDYEADEQDVLAEETAKAKVKENATPYLSRV
IFHPYYKNISYDQLLAMEPELEPGSIVIRPSRRGADHLTVSWKVDDGTLQHIDVLEKEKT
NSFSLGRLLIIGDEEFEDLDEIVARHVQPMASLVRDIMTYRYYRDSRGGDRAVLGALLLQ
EKSNNPDRIPYFLSSTKDRPGYFLLAYMPNRTPHFELFSVRPEGFRFRRLIFPNLDRMIT
WFKEHYNDVPR
NT seq
4716 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcgctagttgattccgaagcatccgaagcttccgagttatcggatgaagaggag
ctaggcggtcaaaaaatctcgaataagcacagacctaaggtgcctgattcgagtgacagt
gaggaagaagaggtcgatctcgctaacgaggaagagatttgtcggaaggagggtgaaggt
tggattgttgacgaggaggaggaagaagaagatggtggtgggtcaggtggctctgatgaa
gacagtgatgatgccggagataatgaaagggacaactacagagacgaagatgacgatgct
ctagatgaggaggacttccaactcatacgagaaaatattggcctggatctgaaaaagcac
aagaagcggcggctggttgtggacgatgatgacgagtccgatggggaacaagtgtcggca
aagaaagttgcacgtgaggtggatcacggacgggaagttgttgctcgtcaaattttcgaa
gatgacgatgacgaggacggtggttcggcagcagacgcaccaaataaggctgctagcttc
agggtcacaggagacgaagaagaggaagaagactatgatgatatgggcgatttcattgtt
gatgaccgggctggtgaggccccagcgaagactaccaggcgtattgttcacaaagacgcg
gcacttcagcaggctcaagacatttttggtgtagatttcgacatgtcggaattcgaggcc
ttccgtaaaggacacgccgctggtagtgaagaatacagtgaagaatcggaggtagagtat
tcagatgacgaggaggcttcggcttccgtcagacgaaaacaaaggaaacctcgttctagt
gtagttttagatgacaaggtttatgaactttttgaccccagtgatctggagcgcgcctac
tacagtcaagctgacgagcgaataaggaaaacagacattccggaacgtttccagttacgc
caggtccccgtacaatcaattgatccttattcaccaaactatgctcaagagttgacggag
ctctcggatgaagctaactggatctacagaaaggcattcaaggaggaaccagaactcaaa
ccaccgtccgttattccaaaaatcttggagacgctcaagctgatgcgggaatcattgttt
gaagtgccgtttatcgctttctaccgcaaggaatgcgttgagcgagatctgaacatcaag
gacctctggcgtatttaccaactagatgaaaagtggaccatactgaaccaacgcaagcgt
aatatgattcagcttttccagaaattacacgatttcttcgaagcaactagcccagatgac
cccgggagtgtacagaaaaaacatgccacttcaattttgaagcttatatcttgtgcgcgt
agcgcggagtccctggaagaattaatcgatgtgcgtttgaactatctgttgcactactcc
agcttcacagaaccaatgcaacgttggttcaaacgaaagcaggaaaaagacgaggctaaa
aaggatggcgtggaggttgatgagaacgaggaagagtcctatctacctgaacaaggaaac
gccatcccattaaccttcagttttgatccgttaacgggtcgacaaatccgtcaacgacag
gcccgagcgacggcttcgtacgaagtagccaaacgagctgctttgggaggcttggttcag
cgtttcggtctgtcagcggctcagttcgcagagaatgttcaggatcagtacttacgccat
gatgtcgatcagtgcccgatgcttcccctagatgcggccggtgattttctctccccgcag
tttcctacagctaacgtggcattaagtgcggcccggtatatgcttgcgtttgagatatca
cgtgaaccatttgtacggcggatgatgagacaaatgtttcagtcacaggcagtcatatct
gttcgcccgactccccgtggtgtgaaagaaatagatgagtcacatccactgatttcaatc
aagtacttgaagaacaagccagtatccgatctgatgggatctgtcctgttccttcatttg
cataatgctagtcttgaaaaactgctcacctacgaaattcacctaccttccgaacatatt
cgtggattatctttgttggacgaacttcaacgtttcttccatcaggatgagttcagttcc
ctagtgcaggcgtggaatgaagagcgcagtttggtgctgaagcaagctgctgaagacttc
atttttcccgttttaatccgtgagctcaaggataggatgcttgaggcgagtcaacaggcg
gttctgcgaatgtgcgcaaagcgactgttcaattacctgcaagtggcaccgtacccacca
gacggtcacaggtcttacgaaacagatactgagaatgcagccagcccattcagtggttct
cgcgggaaacacagtggacggggtcatggggatagtgaatctcatgtgagtggcgctgtg
tggtccaaaggggctcgagttctagccatggcaataaaggacgaagatgacgctagacag
tctgtggtttcagcggtccatctggattcgaacggggaagtcgtcgactttctccatctt
cacggattgatgcagtcaaaccgtgtgcaagaagacttcaagaaacttaaggaaaaggac
atgcagcggctgtcgggtttcatggtcaaacatcgtccgcaggtgatagtcatcggatgt
gactgcaggcgtgctttatacctccaagaagatattcagcgcttagttgacgaacttgcc
tccgagcgccgccttcctcgcattcatgttgagctgatggagactgaactatcaatcgtc
ttcgcccagtcgtctcgtgcgtcggccgatctccctgtatcttattctcctcttctccgt
caagccatttcacttgggcgtcgccttcaagacccgttggctgaattcagtcaactcgtt
aacacggaagaggagattctgggtgtgcgttggcatccactacaagattcactacctcgc
gaaaagctccttgaggcattagaaatagaatttattaaccgtgtgaatgaagtcggtgtg
gacgtcaatcggtgtctatctcacccacacactgcaggcgttttacagtttgtttctggt
cttggaccgcggaaaggtcttcacatgctgaagatcctgagacacagaaagatgttcctt
accaatcgtatgcagctggtcaccgtcatcaagtttggccctcgtgtggtgatcaactcc
gccggtttcattaagatcgatacggctgctgttcgggatttggatgccgatgatgtggag
attctagactctactcgggttcatccggagagctacgacctggcgaagaagatggccgta
gatgcacttgagtatgaggacaatgaggaatgtgatccgacaactgcacttgaggaaatt
gttcaaagccccgcccgtcttcgcgagttggatctagatgctttcgcggaggaattgaag
agacaagaccatggcgataagcacattaccctgtacgacattcggaaggagctaaacaac
agataccgagattaccgcgccccttatcaatcggcaaatccggaaatgatcttcagtatg
gtaacccatgaaacacccgagacgttccacgtcgggcgtctgattgagtgccgcgtagtc
gcagtcgccacacgccgcccacgtccagaacagctagacaatgcaaatccaacgaagaat
gagactaatgggttgtggatgtgccccttctgtcgacaagacaacttccagttcttgaac
aatgtctggagccactttgacaacaacgaatgtccgggtcaagcggtcggacttcgagtt
cagttggacaatggaattgcgggcttcatacctctccgacttaccgatcctcctgctgag
aagttgtttgagcgagctcagcctggtactttgattcggtgtcgcgtaatgaaaattgat
atcacaaagttcaatgtagaactcacatgcaaacagtccgatcttcaagatgagcgccac
atgtggagacctcgaccggatccgttctatgattatgaagctgatgagcaagatgtattg
gccgaggaaacagctaaagcaaaagtgaaggaaaatgcaaccccatatctttcacgcgtc
atcttccatccgtactacaaaaacatcagctacgaccagttgcttgcaatggaacctgaa
ctggagcctggaagtattgtgattcgtccaagtagaaggggtgcggatcatctcactgta
agttggaaagtggatgatggaactctgcaacatattgacgttctggagaaggaaaaaacg
aacagcttttcattgggccgactccttattattggggatgaagagtttgaggatctcgat
gaaatcgttgcccgccacgttcaaccgatggcttcccttgtccgtgatattatgacgtac
cggtactaccgagattccaggggtggtgatcgtgccgtgttgggagcgctacttctacag
gaaaagagcaacaacccagaccgaattccctattttctgagttcaactaaagaccgaccg
ggatatttcctactggcctacatgccaaacagaacgcctcatttcgaactgttcagtgtt
cgccccgaaggattccggttccgccgtttaatcttccctaatctggatcgaatgatcaca
tggttcaaagaacactataacgatgtacctcgctga
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integrated database retrieval system
